Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2302 ATGTCTCTTGCAAAGAGTTGGGATTATGAAGTTGTTTTCAGCTTGTGGTTCTGCTGCTTTTTGCTACCGGTTTCTGCGCAGGATTTTATCACTGATCCCACTGAAGTTGACGCATTGAAAATCATCAAGCAAAGTTTGGTTGATCGTAATGGAAATCTGAGCAACTGGAACAGTGGAGATCCATGTAGATCTAACTGGACAGGGGTTGTATGCTATAATACAACATTAGTTGATGGTTATCTCCACGTTCAAGAATTGCAACTGCTGAGTATGAATTTTTCTGGAACTTTGGCACCAGAGATTGGCCGCTTGGCCTATCTGACAATATTGAGCTTTATGTGGAACAACATAAGTGGGAGTATCCCGAAGGAAATTGGCAATATCTATACCTTGGAGCTCTTACTCTTGAATGGCAACCACTTAACAGGGCCTTTGCCAGAAGAGCTTGGTTATCTTCCAAATTTAAACAGAATTCAAATTGATCAAAACAAAATATCAGGACCTTTACCTGCATCATTTGCAAACCTGAACATGACAAAGCACTTTCACATGAACAACAATTCGATTAGTGGACAAATCCCACCAGAGCTCTCCCGCATGCCAAATCTTGTCCACCTTCTTCTTGACAATAACAACTTATCAGGATATCTTCCTCCTGAGCTCTCTGAGATGCCCAACATACTTATCATTCAACTTGACAACAACAACTTCAGTGGGAATACAATTCCAGCGTCTTACGGCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAATTGCAGCTTGCAAGGATCGGTTCCTGATTTAAGTAGGATACCGGAACTTGGTTATCTTGACCTCAGTTCCAATGAGTTGAATGGATCAATTCCTCCTAACAAGCTTTCTGACAATGTTACAACAATTGATTTATCAAACAACGAGCTTACTGGAACCATTCCATCCTATTTTTCTCTTCTTCCTCTTCTTCAGAGATTGTCAATTGCAAACAATTCTTTGAATGGCAGTATTCCTTCTACCATTTGGCAGAGCAAGACTTTAAATGCAACGGAAAGCTTTATCATGGAATTTCAACATAATAGTTTTACAAGCATATCAGGCAGTACTAGCCTTCCTCCAAATGTCTCACTCTGGCTTGAGGGAAATCCTCTATGTTCTAATGATAGCCTAGCTCAGTTTTGCGGATTAGAAGCCAATAACACTGATACTATGGTTTCAACATACTTCAATGGTAGCTGTCCTAGTGCAGCATGCCCCCCTCCTTTTGAATATTCTCCATCATCTCCAGAGAAATGTTTCTGTGCAGCCCCTTTGATTGTTGAATATCGGCTGAAAAGTCCGGGAATTTCAGCTTTTCCTTCTTATATAGATTTATTTGAGAACTATCTGACAGATGGACTTAAGTTATTCATTTATCAACTACACATTGATACATATTTTTGGGAAGAAGGGCCACGACTGAGAATGCTCTTGAAGCTTTATCCTGTCTATCTTGTTCAGAACCAAAGCTCACATATTTTCAACAGAAGCGAGGTTCTAAGGCTAAGAAGCATGTTCACAGGATGGTTAATTCCTGACAACGATATATTTGGGCCTTATGAACTACTTGGCTTCCATCTCCTAGATCCTTACAAGGATTTGATAGAAACCTCTAGACAAAGTTCAAGGATAAGCACGGGTGCACTGATTGGCATAATAATAGGGACAATTGCCTGTGCTGTTATAGTATCTGTAACTGTCAGTCTTCTTATAGTCAGAGTGCTCATGAGACGTTGGCGCTCAATATCAAAACGACATCAAACTTCAAAGGTTTCCATAAAAATTGATGGTGTGAGGGCCTTTACATATGAAGAAATGGCACAGGCTACAAACAATTTTAGCAACACAGCACAAGTTGGCCAAGGTGGTTATGGGAAGGTTTATAAAGGAAATCTTGCTGATGGCACTGTGGTTGCCATAAAGCGTGCGCAGGAGGGATCCCTGCAAGGTGAGAGGGAGTTCCTGACAGAAATACAATTATTATCCAGGTTACATCATCGTAACCTTGTGTCTTTAGTTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCAAATGGCACACTTAGGGATCACCTTTCTGCTAATTCAAAAGAAGCTCTGAGTTTTGCTATGAGAATGAGGATTGCATTAGGGTCAGCTAAAGGTATTCTGTATCTACATACAGAAGCAGACCCGCCAATATTCCACCGAGATGTCAAGGCTAGCAACATATTATTGGATTCTAAGTTCACAGCAAAAGTTGCTGATTTTGGACTATCACGGCTTGCCCCTGTTCCAGACATTGAAGGAGTTGTGCCAGCTCATGTATCTACTGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCATAAGCTGACAGACAAGAGTGATGTTTACAGTCTTGGTGTTGTATTTCTGGAACTATTGACTGGGATGCAACCAATCTCGCATGGCAAAAACATTGTTAGAGAGGTTAATATTGCATACCAATCTGGTGTGACATTCTCTGTTGTTGATGGACGCATGGGGTCTTACTCTTCAGAGTGTGTTGAGAAATTCTTGAATCTGTCCTTAAAGTGTTGCCAAGATGAGCCAGATGCACGGCCTAAAATGGCGGAAGTGGTTCGAGAGCTTGAAAATATATGGGCTTTGATGCCGGAGTCTGATACCAGGAGAGCTGAATCTATAACCCCTGGTAGTGATTCTGGAAAATTGGTTAGTTCATCTTCATCTTCTACTGTAAAGACTCCCTTTGTATCCGGAGATGTGTCAGGTAGTGACCTTGTCAGTGGGGTGGTGCCAATCATTACGCCAAGATAG 2868 0.4118 MSLAKSWDYEVVFSLWFCCFLLPVSAQDFITDPTEVDALKIIKQSLVDRNGNLSNWNSGDPCRSNWTGVVCYNTTLVDGYLHVQELQLLSMNFSGTLAPEIGRLAYLTILSFMWNNISGSIPKEIGNIYTLELLLLNGNHLTGPLPEELGYLPNLNRIQIDQNKISGPLPASFANLNMTKHFHMNNNSISGQIPPELSRMPNLVHLLLDNNNLSGYLPPELSEMPNILIIQLDNNNFSGNTIPASYGNMSKLLKLSLRNCSLQGSVPDLSRIPELGYLDLSSNELNGSIPPNKLSDNVTTIDLSNNELTGTIPSYFSLLPLLQRLSIANNSLNGSIPSTIWQSKTLNATESFIMEFQHNSFTSISGSTSLPPNVSLWLEGNPLCSNDSLAQFCGLEANNTDTMVSTYFNGSCPSAACPPPFEYSPSSPEKCFCAAPLIVEYRLKSPGISAFPSYIDLFENYLTDGLKLFIYQLHIDTYFWEEGPRLRMLLKLYPVYLVQNQSSHIFNRSEVLRLRSMFTGWLIPDNDIFGPYELLGFHLLDPYKDLIETSRQSSRISTGALIGIIIGTIACAVIVSVTVSLLIVRVLMRRWRSISKRHQTSKVSIKIDGVRAFTYEEMAQATNNFSNTAQVGQGGYGKVYKGNLADGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDHLSANSKEALSFAMRMRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDIEGVVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSGVTFSVVDGRMGSYSSECVEKFLNLSLKCCQDEPDARPKMAEVVRELENIWALMPESDTRRAESITPGSDSGKLVSSSSSSTVKTPFVSGDVSGSDLVSGVVPIITPR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2302 955 SUPERFAMILY L domain-like 47 399 - -
Prci2g2302 955 Gene3D Phosphorylase Kinase; domain 1 595 700 - -
Prci2g2302 955 MobiDBLite consensus disorder prediction 906 931 - -
Prci2g2302 955 ProSiteProfiles Protein kinase domain profile. 625 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2302 955 CDD STKc_IRAK 631 897 - -
Prci2g2302 955 Gene3D Transferase(Phosphotransferase) domain 1 701 912 - -
Prci2g2302 955 MobiDBLite consensus disorder prediction 909 931 - -
Prci2g2302 955 PANTHER RECEPTOR-LIKE PROTEIN 55 42 897 - -
Prci2g2302 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 191 - -
Prci2g2302 955 Gene3D Ribonuclease Inhibitor 31 295 IPR032675 -
Prci2g2302 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 701 911 - -
Prci2g2302 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Prci2g2302 955 Pfam Protein tyrosine and serine/threonine kinase 628 894 IPR001245 GO:0004672|GO:0006468
Prci2g2302 955 FunFam Leucine-rich repeat protein kinase family protein 589 700 - -
Prci2g2302 955 SUPERFAMILY Protein kinase-like (PK-like) 599 895 IPR011009 -
Prci2g2302 955 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Prci2g2302 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 192 294 - -
Prci2g2302 955 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
Prci2g2302 955 Gene3D Ribonuclease Inhibitor 296 387 IPR032675 -
Prci2g2302 955 SMART serkin_6 625 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2302 Prci-Chr2 18137751 18154990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2302 18 907 Receptor kinase-like Gene Family AT5G01950 59.197 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci2g2302 PK_Tyr_Ser-Thr 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2302 - - tcc:18591108 1347.03