Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2256 ATGGCCGATGTGGTTGCTCCACTGCCTAGTCACGATCTCTCCGAGCCTGGTATCGATGTCAAGCTCTTCAATCGATGGCCCTACGACGATGTTCAGGTGAACGACATATCCTTGGCTGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCTCACACTGCTGGGAGGTATTCAGTGAAGCGTTTTAGGAAAGCGCAGTGTCCAATAGTTGAGAGGCTTACCAACTCTCTTATGATGCACGGACGAAATAATGGGAAAAAGCTTATGGCTGTGAGGATTGTTAAGCATGCAATGGAAATTATCCACTTGCTCACTGATCAAAATCCCATCCAAGTCATTGTTGATGCTGTGATCAACAGTGGACCAAGAGAAGATGCTACGCGTATTGGATCTGCCGGTGTTGTCAGACGTCAAGCTGTGGATATTTCTCCTCTGCGACGTGTGAATCAGGCAATTTATCTGCTTACCACTGGAGCTCGTGAGGCTGCTTTCAGGAACATTAAAACAATTGCTGAATGCTTGGCTGATGAACTTATCAATGCTGCAAAGGGATCATCAAACAGCTATGCCATCAAGAAAAAGGATGAGATCGAGAGAGTTGCTAAGGCCAACCGTTGA 627 0.4673 MADVVAPLPSHDLSEPGIDVKLFNRWPYDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2256 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 4 208 IPR000235 GO:0006412
Prci2g2256 208 NCBIfam 30S ribosomal protein S7 20 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Prci2g2256 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Prci2g2256 208 Pfam Ribosomal protein S7p/S5e 62 208 IPR023798 -
Prci2g2256 208 PANTHER RIBOSOMAL PROTEIN S7 9 208 IPR000235 GO:0006412
Prci2g2256 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Prci2g2256 208 FunFam 40S ribosomal protein S5 5 208 - -
Prci2g2256 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Prci2g2256 208 Gene3D Ribosomal protein S7 domain 3 208 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2256 Prci-Chr2 17665410 17667477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2256 19 208 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.105 5.31e-133 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2256 K02989 - cave:132191890 371.318