Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2234 ATGTACCTACAACATAAGCCTTTGTTCTTCTTCGTCTTGAGCTTCATAATCTGGTCATGGTGGACTCTGGACGGCGTCGTTTCAGACCCGCAGACCAACTTCGTGAAAATAGGGTGTAGCCAGTACAACGTCACGGACGTGAACATCTTCCATCAGAACCTAAACGCAACGTTTCAAGACCTGAAAGCTCAGATCGGAAACCAGAGCAAACACTTCGCGACGGCGCAGGCGGTGAAGGGAAACAACCCGGCTTATGCTCTCTTTCAGTGCAGAAACTACCTCTCCATCTCCGACTGTCTCAAGTGCTTCGACTTCGCCGCCGATCACATTCGTAACTGCTCCGTCGGCGTCACCGGGGCTCGTATCATCTACGAAGGTTGCTTCCTCAGGTACGAGAGCAGTGGCTTCTTTGACCAGAACACAGACGCTGGCAACAACATTGTGTGTGGGAATAAACCAAGAAACTCCACCGAACTTGCATCAACAGTGGAAAAAGTACTAACGGATCTGGAAACAGCAACACCAAGAATACCTGGTTTCTATGCAGCCACTAAAACGCAAGTGCCTAATAGTAACACTTCAATTTATGCCTTTGCTCAATGTCTTGAGACTGTCACTCAAAGCGGCTGCCAGGATTGCTTGAACACTGGCTTTAAAAACTTTCAGATTTGTCTTCCCAATTCAAATGCTAAGACTTATGACGCTGGTTGTTTCATGAGATACTCCACCACTGCCTTCTTTGCTGATAATCAAACCACTAATATCAAGCAGTTCTTGAAACAAGGAGGTTCAAACAAGAAGGCCATTATAGGTGGAGTTGTTGGGGGTGCTTCTTTCATTCTGATCCTCCTTGCATTATTTGTTTTGTACAGACGATCAACTTCGACCAAGAGGATTCGTAGAGGTGACATTTTGGGAGCAACTGAATTGAAAGGCCCTGTTAACTACAGGTATAAAGATCTCAAGGCTGCAACAAAAAATTTCAGTAAAGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTGTACAAGGGCACTCTGAAAAATGGAAAAATAGTTGCTGTCAAGAAATTGGCTTTAGGCCAATCCAAACAGATGGAGAAAGACTTTGAGAGTGAAGTGAAGTTGATAAGCAATGTTCATCATCGAAACCTTATTCGGCTTCTAGGATGTTGCAGTAAAGGCCAAGAGAGATTTCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATTCTTATTTGGTACAAATAAGGGTTCCCTCAATTGGAAGCAACGCTATAACATAATTTTGGGCACTGCAAGGGGTTTGGCTTATCTGCATGAGGAATTCCATGTTTGTATTATTCATAGAGATATAAAGACTAGCAATATTCTCTTGGATGATGATTTCCAACCTAAAATTGCTGACTTTGGGTTGGCAAGACTTTTGCCAAAGGACCAATCTCATCTCAACACAAAATTTGCAGGAACAATGGGATACACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGTTGATACTTATAGCTATGGTGTTGTACTTCTAGAAATCATAAGTGGACAAAAGAGTGGTGAATTGAAGATTGATGATTCAAGCGAACTCCTCCTTCAAAGAGCTTGGAGACTGCATGAGAGAGGAATGCACATAGATTTTGTGGATAAAACCTTAGATCCAAATGAATACGATGCAGAAGAAGTAAAGAAAATAATAGAGATTGCATTGCTGTGCACTCAAGCATCTCCCGCAGCTAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAAGCAAGGGCTTAATGGAGCACAAGAAACCAACTATGCCTGTCTATGTTGATACTAATTTGAGGCCTAGAACAAACAATTCTATGTCTAATGGTACATCTTCATCAAATGCTACTGTTTCCATTTCGAGTCTATCAGGAAGGTGA 1944 0.4208 MYLQHKPLFFFVLSFIIWSWWTLDGVVSDPQTNFVKIGCSQYNVTDVNIFHQNLNATFQDLKAQIGNQSKHFATAQAVKGNNPAYALFQCRNYLSISDCLKCFDFAADHIRNCSVGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKPRNSTELASTVEKVLTDLETATPRIPGFYAATKTQVPNSNTSIYAFAQCLETVTQSGCQDCLNTGFKNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTTNIKQFLKQGGSNKKAIIGGVVGGASFILILLALFVLYRRSTSTKRIRRGDILGATELKGPVNYRYKDLKAATKNFSKENKLGEGGFGDVYKGTLKNGKIVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLIRLLGCCSKGQERFLVYEYMKNNNVGQFLFGTNKGSLNWKQRYNIILGTARGLAYLHEEFHVCIIHRDIKTSNILLDDDFQPKIADFGLARLLPKDQSHLNTKFAGTMGYTAPEYAMHGQLSEKVDTYSYGVVLLEIISGQKSGELKIDDSSELLLQRAWRLHERGMHIDFVDKTLDPNEYDAEEVKKIIEIALLCTQASPAARPTMSEIVVMLKSKGLMEHKKPTMPVYVDTNLRPRTNNSMSNGTSSSNATVSISSLSGR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2234 647 FunFam Cysteine-rich receptor-like protein kinase 2 294 404 - -
Prci2g2234 647 FunFam Cysteine-rich receptor-like protein kinase 2 31 136 - -
Prci2g2234 647 SMART serkin_6 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2234 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Prci2g2234 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 635 - -
Prci2g2234 647 CDD STKc_IRAK 334 600 - -
Prci2g2234 647 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
Prci2g2234 647 Gene3D Phosphorylase Kinase; domain 1 292 404 - -
Prci2g2234 647 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2234 647 SUPERFAMILY Protein kinase-like (PK-like) 311 599 IPR011009 -
Prci2g2234 647 Gene3D - 145 246 IPR038408 -
Prci2g2234 647 Gene3D - 31 136 IPR038408 -
Prci2g2234 647 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Prci2g2234 647 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Prci2g2234 647 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Prci2g2234 647 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Prci2g2234 647 FunFam Cysteine-rich receptor-like protein kinase 2 144 246 - -
Prci2g2234 647 MobiDBLite consensus disorder prediction 616 647 - -
Prci2g2234 647 FunFam Cysteine-rich receptor-like protein kinase 2 405 607 - -
Prci2g2234 647 Pfam Protein kinase domain 328 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2234 647 MobiDBLite consensus disorder prediction 618 647 - -
Prci2g2234 647 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2234 Prci-Chr2 17411106 17416494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2234 7 647 Receptor kinase-like Gene Family AT1G70520 36.196 2.38e-130 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2234 Pkinase 8.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2234 - - gmx:100813585 911.753