Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2233 ATGCTGCTTCACCTGCAACAAAAACCCTTGTTCATCTTCTTGTTGAGCTTCACAATCTGGTCATGGTGGACTCTTGACGGCGTCGTTTCAGACCCACAGCTCAGTTATGTGAAATCGGGTTGTAGCTCCTATAACGTCAGCGACGTGACCATCTTCAATGAGAACCTAAACACAACGATGCGAAGCCTAAGAGCTCAGATCAGCAACCAAAGCAAACACTCGGCGACGGCGCAGGCGGTGAAGGGTAACAATCCGGCGTACGGCGTTTTTCAGTGCAGAAACTACCTCTCCATCAAAGACTGCCTCGCCTGCTTCGACATCGCCGCTGTTCAGATTTACAATAACTGCTCCGTCGCCGCCACCGGCGCTCGCCTTATTTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTTTCTTCTACGACCAGTCCGTAGACGGTGGCAACCACCTTATGTGTGGGAATCGTGTTGTTAAAAACTCCACCGAACTTGCTTCAACAGTGCAACAAGTCCTAAAGAATCTGGAATTAGCAACACCAAGAATCCCTGGGTACTTTGCAGCCACTATAACACAAGTACCTAACAGTAATGGTTCAAACATTTATGCCTTTGCTCAATGTCTCGAGACTCTCACTCAAAGTGGCTGCCAGGATTGTTTGGAGTCTGGGTTGAGAAATTTTCAGATTTGTCTTCCAAACTCAAATGCTAAGATTTTTTATGCTGGTTGTTTCATGAGATACTCCACCACTGCGTTTTTTGCTGCTAATCAGACCACTGATCTCAAGAACATCCTGAAACAAGGAGGTTCAACCAAGAAGAAGGCCATTATTGGTGGAGCCGTTGGAGGTGCATCTTTTATTTTGATTCTCTTTGCATTACTTGCTTTGTACAGACGATCATTGTCCAAGAGGGTTCATAGAGTTGACGTTTTGGGAGCAACTGAGTTGAAAGGCCCGGTTAACTACAGGTATAAAGATCTAAAGTCTGCAACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACACTAAAAAACGGAAAAGTAATTGCTATAAAGAAATTGGCTTTGGAGCAATCCAAAAAGATGGATGAAGATTTTGAGAGTGAGGTAAAGTTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGATGTTGCAGCAAAGGCAAAGAGAGATTCCTTGTGTATGAGTACATGAGGAACAACAACGTTGGCCAATTCTTATTTGGTGAAAATAAAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATATTAGGAACTGCAAGGGGTTTGGCATATCTTCATGAGGGATTCCACATTTGCATCATACATAGAGATATAAAGCCTAACAACATCCTCTTGGATGATGATTTCCAACCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGTGATCAATCTCATCTCAATACAAAATTTGCCGGGACGATGGGATACACTGCACCAGAGTACATAATGCATGGACAATTATCTGAGAAGGTTGATACCTATTGCTATGGTGTTGTAATCTTAGAGATCATGAGTGGGCAAAAGAGTGGTGAATTAAAGGATGATGATAGGGAATTCCTCCTTCAAAGAGCTTGGAAACTGTATGACAGAGAAATGCACATAGAGTTTGTGGACAAAACCTTAGACGCAAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACACAAGCATCTCCTGCATCAAGGCCAACAATGTGTGAAGTTGTTGATATGCTGGAAAGCAAGGATGGCTTAATGGATCACAAGAGACCCACTATGCCTGTTTATGTTGATCCTAATCTGAGGCCTACTAGAGATATCTCTCAGTCTAGTAGTTCATCTTTATCAAATGCTACTGACTCCACTTCTATGCCATCAGGAAGGTGA 1959 0.4247 MLLHLQQKPLFIFLLSFTIWSWWTLDGVVSDPQLSYVKSGCSSYNVSDVTIFNENLNTTMRSLRAQISNQSKHSATAQAVKGNNPAYGVFQCRNYLSIKDCLACFDIAAVQIYNNCSVAATGARLIYEGCFLRYESSFFYDQSVDGGNHLMCGNRVVKNSTELASTVQQVLKNLELATPRIPGYFAATITQVPNSNGSNIYAFAQCLETLTQSGCQDCLESGLRNFQICLPNSNAKIFYAGCFMRYSTTAFFAANQTTDLKNILKQGGSTKKKAIIGGAVGGASFILILFALLALYRRSLSKRVHRVDVLGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGKVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGKERFLVYEYMRNNNVGQFLFGENKGSLNWKQRYGIILGTARGLAYLHEGFHICIIHRDIKPNNILLDDDFQPKIADFGLARLLPSDQSHLNTKFAGTMGYTAPEYIMHGQLSEKVDTYCYGVVILEIMSGQKSGELKDDDREFLLQRAWKLYDREMHIEFVDKTLDASEYDAEEVKKIIEIGLLCTQASPASRPTMCEVVDMLESKDGLMDHKRPTMPVYVDPNLRPTRDISQSSSSSLSNATDSTSMPSGR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2233 652 MobiDBLite consensus disorder prediction 613 652 - -
Prci2g2233 652 SUPERFAMILY Protein kinase-like (PK-like) 321 638 IPR011009 -
Prci2g2233 652 CDD STKc_IRAK 339 604 - -
Prci2g2233 652 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2233 652 MobiDBLite consensus disorder prediction 627 652 - -
Prci2g2233 652 Pfam Protein kinase domain 334 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2233 652 Pfam Salt stress response/antifungal 159 248 IPR002902 -
Prci2g2233 652 Pfam Salt stress response/antifungal 44 136 IPR002902 -
Prci2g2233 652 Gene3D Transferase(Phosphotransferase) domain 1 410 617 - -
Prci2g2233 652 Gene3D Phosphorylase Kinase; domain 1 297 409 - -
Prci2g2233 652 FunFam Cysteine-rich receptor-like protein kinase 2 410 611 - -
Prci2g2233 652 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 636 - -
Prci2g2233 652 Gene3D - 148 251 IPR038408 -
Prci2g2233 652 Gene3D - 33 139 IPR038408 -
Prci2g2233 652 Coils Coil 53 73 - -
Prci2g2233 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Prci2g2233 652 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Prci2g2233 652 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Prci2g2233 652 FunFam Cysteine-rich receptor-like protein kinase 2 300 409 - -
Prci2g2233 652 SMART serkin_6 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2233 652 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Prci2g2233 652 ProSiteProfiles Protein kinase domain profile. 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2233 Prci-Chr2 17342799 17350017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2233 2 652 Receptor kinase-like Gene Family AT1G70520 36.078 5.81e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2233 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2233 - - gmx:100813585 834.713