Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g2232 | ATGCTGCTTCACCTGCAACAAAAACCCTTGTTCATCTTCTTGTTGAGCTTCACAATCTGGTCATGGTGGACTCTTGACGGCGTCGTTTCAGACCCACAGCTCAGTTATGTGAAATCGGGTTGTAGCTCCTATAACGTCAGCGACGTGACCATCTTCAATGAGAACCTAAACACAACGATGCGAAGCCTAAGAGCTCAGATCAGCAACCAAAGCAAACACTCGGCGACGGCGCAGGCGGTGAAGGGTAACAATCCGGCGTACGGCGTTTTTCAGTGCAGAAACTACCTCTCCATCAAAGACTGCCTCGCCTGCTTCGACATCGCCGCTGTTCAGATTTACAATAACTGCTCCGTCGCCGCCACCGGCGCTCGCCTTATTTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTTTCTTCTACGACCAGTCCGTAGACGGTGGCAACCACCTTATGTGTGGGAATCGTGTTGTTAAAAACTCCACCGAACTTGCTTCAACAGTGCAACAAGTCCTAAAGAATCTGGAATTAGCAACACCAAGAATCCCTGGGTACTTTGCAGCCACTATAACACAAGTACCTAACAGTAATGGTTCAAACATTTATGCCTTTGCTCAATGTCTCGAGACTCTCACTCAAAGTGGCTGCCAGGATTGTTTGGAGTCTGGGTTGAGAAATTTTCAGATTTGTCTTCCAAACTCAAATGCTAAGATTTTTTATGCTGGTTGTTTCATGAGATACTCCACCACTGCGTTTTTTGCTGCTAATCAGACCACTGATCTCAAGAACATCCTGAAACAAGGAGGTTCAACCAAGAAGAAGGCCATTATTGGTGGAGCCGTTGGAGGTGCATCTTTTATTTTGATTCTCTTTGCATTACTTGCTTTGTACAGACGATCATTGTCCAAGAGGGTTCATAGAGTTGACGTTTTGGGAGCAACTGAGTTGAAAGGCCCGGTTAACTACAGGTATAAAGATCTAAAGTCTGCAACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACACTAAAAAACGGAAAAGTAATTGCTATAAAGAAATTGGCTTTGGAGCAATCCAAAAAGATGGATGAAGATTTTGAGAGTGAGGTAAAGTTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGATGTTGCAGCAAAGGCAAAGAGAGATTCCTTGTGTATGAGTACATGAGGAACAACAACGTTGGCCAATTCTTATTTGTGTTGGAAATAGGTGAAAATAAAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATATTAGGAACTGCAAGGGGTTTGGCATATCTTCATGAGGGATTCCACATTTGCATCATACATAGAGATATAAAGCCTAACAACATCCTCTTGGATGATGATTTCCAACCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGTGATCAATCTCATCTCAATACAAAATTTGCCGGGACGATGGGATACACTGCACCAGAGTACATAATGCATGGACAATTATCTGAGAAGGTTGATACCTATTGCTATGGTGTTGTAATCTTAGAGATCATGAGTGGGCAAAAGAGTGGTGAATTAAAGGATGATGATAGGGAATTCCTCCTTCAAAGAGCTTGGAAACTGTATGACAGAGAAATGCACATAGAGTTTGTGGACAAAACCTTAGACGCAAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACACAAGCATCTCCTGCATCAAGGCCAACAATGTGTGAAGTTGTTGATATGCTGGAAAGCAAGGATGGCTTAATGGATCACAAGAGACCCACTATGCCTGTTTATGTTGATCCTAATCTGAGGCCTACTAGAGATATCTCTCAGTCTAGTAGTTCATCTTTATCAAATGCTACTGACTCCACTTCTATGCCATCAGGAAGGTGA | 1971 | 0.4242 | MLLHLQQKPLFIFLLSFTIWSWWTLDGVVSDPQLSYVKSGCSSYNVSDVTIFNENLNTTMRSLRAQISNQSKHSATAQAVKGNNPAYGVFQCRNYLSIKDCLACFDIAAVQIYNNCSVAATGARLIYEGCFLRYESSFFYDQSVDGGNHLMCGNRVVKNSTELASTVQQVLKNLELATPRIPGYFAATITQVPNSNGSNIYAFAQCLETLTQSGCQDCLESGLRNFQICLPNSNAKIFYAGCFMRYSTTAFFAANQTTDLKNILKQGGSTKKKAIIGGAVGGASFILILFALLALYRRSLSKRVHRVDVLGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGKVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGKERFLVYEYMRNNNVGQFLFVLEIGENKGSLNWKQRYGIILGTARGLAYLHEGFHICIIHRDIKPNNILLDDDFQPKIADFGLARLLPSDQSHLNTKFAGTMGYTAPEYIMHGQLSEKVDTYCYGVVILEIMSGQKSGELKDDDREFLLQRAWKLYDREMHIEFVDKTLDASEYDAEEVKKIIEIGLLCTQASPASRPTMCEVVDMLESKDGLMDHKRPTMPVYVDPNLRPTRDISQSSSSSLSNATDSTSMPSGR | 656 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g2232 | 656 | Gene3D | - | 148 | 251 | IPR038408 | - | |
Prci2g2232 | 656 | Gene3D | - | 33 | 139 | IPR038408 | - | |
Prci2g2232 | 656 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 458 | 470 | IPR008271 | GO:0004672|GO:0006468 | |
Prci2g2232 | 656 | Pfam | Protein kinase domain | 334 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2232 | 656 | ProSitePatterns | Protein kinases ATP-binding region signature. | 339 | 362 | IPR017441 | GO:0005524 | |
Prci2g2232 | 656 | Gene3D | Transferase(Phosphotransferase) domain 1 | 410 | 621 | - | - | |
Prci2g2232 | 656 | MobiDBLite | consensus disorder prediction | 617 | 656 | - | - | |
Prci2g2232 | 656 | ProSiteProfiles | Protein kinase domain profile. | 333 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2232 | 656 | SUPERFAMILY | Protein kinase-like (PK-like) | 321 | 642 | IPR011009 | - | |
Prci2g2232 | 656 | MobiDBLite | consensus disorder prediction | 631 | 656 | - | - | |
Prci2g2232 | 656 | CDD | STKc_IRAK | 339 | 608 | - | - | |
Prci2g2232 | 656 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 147 | 251 | - | - | |
Prci2g2232 | 656 | Coils | Coil | 53 | 73 | - | - | |
Prci2g2232 | 656 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 410 | 615 | - | - | |
Prci2g2232 | 656 | Pfam | Salt stress response/antifungal | 44 | 136 | IPR002902 | - | |
Prci2g2232 | 656 | Pfam | Salt stress response/antifungal | 159 | 248 | IPR002902 | - | |
Prci2g2232 | 656 | ProSiteProfiles | Gnk2-homologous domain profile. | 145 | 251 | IPR002902 | - | |
Prci2g2232 | 656 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 300 | 409 | - | - | |
Prci2g2232 | 656 | SMART | serkin_6 | 333 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2232 | 656 | ProSiteProfiles | Gnk2-homologous domain profile. | 34 | 139 | IPR002902 | - | |
Prci2g2232 | 656 | Gene3D | Phosphorylase Kinase; domain 1 | 297 | 409 | - | - | |
Prci2g2232 | 656 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 88 | 640 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g2232 | Prci-Chr2 | 17342789 | 17350017 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g2232 | 2 | 656 | Receptor kinase-like Gene Family | AT1G70520 | 35.768 | 3.64e-122 | 375 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Prci2g2232 | Pkinase | 3e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g2232 | - | - | gmx:100813585 | 828.935 |