Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2232 ATGCTGCTTCACCTGCAACAAAAACCCTTGTTCATCTTCTTGTTGAGCTTCACAATCTGGTCATGGTGGACTCTTGACGGCGTCGTTTCAGACCCACAGCTCAGTTATGTGAAATCGGGTTGTAGCTCCTATAACGTCAGCGACGTGACCATCTTCAATGAGAACCTAAACACAACGATGCGAAGCCTAAGAGCTCAGATCAGCAACCAAAGCAAACACTCGGCGACGGCGCAGGCGGTGAAGGGTAACAATCCGGCGTACGGCGTTTTTCAGTGCAGAAACTACCTCTCCATCAAAGACTGCCTCGCCTGCTTCGACATCGCCGCTGTTCAGATTTACAATAACTGCTCCGTCGCCGCCACCGGCGCTCGCCTTATTTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTTTCTTCTACGACCAGTCCGTAGACGGTGGCAACCACCTTATGTGTGGGAATCGTGTTGTTAAAAACTCCACCGAACTTGCTTCAACAGTGCAACAAGTCCTAAAGAATCTGGAATTAGCAACACCAAGAATCCCTGGGTACTTTGCAGCCACTATAACACAAGTACCTAACAGTAATGGTTCAAACATTTATGCCTTTGCTCAATGTCTCGAGACTCTCACTCAAAGTGGCTGCCAGGATTGTTTGGAGTCTGGGTTGAGAAATTTTCAGATTTGTCTTCCAAACTCAAATGCTAAGATTTTTTATGCTGGTTGTTTCATGAGATACTCCACCACTGCGTTTTTTGCTGCTAATCAGACCACTGATCTCAAGAACATCCTGAAACAAGGAGGTTCAACCAAGAAGAAGGCCATTATTGGTGGAGCCGTTGGAGGTGCATCTTTTATTTTGATTCTCTTTGCATTACTTGCTTTGTACAGACGATCATTGTCCAAGAGGGTTCATAGAGTTGACGTTTTGGGAGCAACTGAGTTGAAAGGCCCGGTTAACTACAGGTATAAAGATCTAAAGTCTGCAACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACACTAAAAAACGGAAAAGTAATTGCTATAAAGAAATTGGCTTTGGAGCAATCCAAAAAGATGGATGAAGATTTTGAGAGTGAGGTAAAGTTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGATGTTGCAGCAAAGGCAAAGAGAGATTCCTTGTGTATGAGTACATGAGGAACAACAACGTTGGCCAATTCTTATTTGTGTTGGAAATAGGTGAAAATAAAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATATTAGGAACTGCAAGGGGTTTGGCATATCTTCATGAGGGATTCCACATTTGCATCATACATAGAGATATAAAGCCTAACAACATCCTCTTGGATGATGATTTCCAACCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGTGATCAATCTCATCTCAATACAAAATTTGCCGGGACGATGGGATACACTGCACCAGAGTACATAATGCATGGACAATTATCTGAGAAGGTTGATACCTATTGCTATGGTGTTGTAATCTTAGAGATCATGAGTGGGCAAAAGAGTGGTGAATTAAAGGATGATGATAGGGAATTCCTCCTTCAAAGAGCTTGGAAACTGTATGACAGAGAAATGCACATAGAGTTTGTGGACAAAACCTTAGACGCAAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACACAAGCATCTCCTGCATCAAGGCCAACAATGTGTGAAGTTGTTGATATGCTGGAAAGCAAGGATGGCTTAATGGATCACAAGAGACCCACTATGCCTGTTTATGTTGATCCTAATCTGAGGCCTACTAGAGATATCTCTCAGTCTAGTAGTTCATCTTTATCAAATGCTACTGACTCCACTTCTATGCCATCAGGAAGGTGA 1971 0.4242 MLLHLQQKPLFIFLLSFTIWSWWTLDGVVSDPQLSYVKSGCSSYNVSDVTIFNENLNTTMRSLRAQISNQSKHSATAQAVKGNNPAYGVFQCRNYLSIKDCLACFDIAAVQIYNNCSVAATGARLIYEGCFLRYESSFFYDQSVDGGNHLMCGNRVVKNSTELASTVQQVLKNLELATPRIPGYFAATITQVPNSNGSNIYAFAQCLETLTQSGCQDCLESGLRNFQICLPNSNAKIFYAGCFMRYSTTAFFAANQTTDLKNILKQGGSTKKKAIIGGAVGGASFILILFALLALYRRSLSKRVHRVDVLGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGKVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGKERFLVYEYMRNNNVGQFLFVLEIGENKGSLNWKQRYGIILGTARGLAYLHEGFHICIIHRDIKPNNILLDDDFQPKIADFGLARLLPSDQSHLNTKFAGTMGYTAPEYIMHGQLSEKVDTYCYGVVILEIMSGQKSGELKDDDREFLLQRAWKLYDREMHIEFVDKTLDASEYDAEEVKKIIEIGLLCTQASPASRPTMCEVVDMLESKDGLMDHKRPTMPVYVDPNLRPTRDISQSSSSSLSNATDSTSMPSGR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2232 656 Gene3D - 148 251 IPR038408 -
Prci2g2232 656 Gene3D - 33 139 IPR038408 -
Prci2g2232 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Prci2g2232 656 Pfam Protein kinase domain 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2232 656 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2232 656 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Prci2g2232 656 MobiDBLite consensus disorder prediction 617 656 - -
Prci2g2232 656 ProSiteProfiles Protein kinase domain profile. 333 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2232 656 SUPERFAMILY Protein kinase-like (PK-like) 321 642 IPR011009 -
Prci2g2232 656 MobiDBLite consensus disorder prediction 631 656 - -
Prci2g2232 656 CDD STKc_IRAK 339 608 - -
Prci2g2232 656 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Prci2g2232 656 Coils Coil 53 73 - -
Prci2g2232 656 FunFam Cysteine-rich receptor-like protein kinase 2 410 615 - -
Prci2g2232 656 Pfam Salt stress response/antifungal 44 136 IPR002902 -
Prci2g2232 656 Pfam Salt stress response/antifungal 159 248 IPR002902 -
Prci2g2232 656 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Prci2g2232 656 FunFam Cysteine-rich receptor-like protein kinase 2 300 409 - -
Prci2g2232 656 SMART serkin_6 333 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2232 656 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Prci2g2232 656 Gene3D Phosphorylase Kinase; domain 1 297 409 - -
Prci2g2232 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2232 Prci-Chr2 17342789 17350017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2232 2 656 Receptor kinase-like Gene Family AT1G70520 35.768 3.64e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2232 Pkinase 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2232 - - gmx:100813585 828.935