Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2231 ATGCTGCTTCACCTGCAACAAAAACCCTTGTTCATCTTCTTGTTGAGCTTCACAATCTGGTCATGGTGGACTCTTGACGGCGTCGTTTCAGACCCACAGCTCAGTTATGTGAAATCGGGTTGTAGCTCCTATAACGTCAGCGACGTGACCATCTTCAATGAGAACCTAAACACAACGATGCGAAGCCTAAGAGCTCAGATCAGCAACCAAAGCAAACACTCGGCGACGGCGCAGGCGGTGAAGGGTAACAATCCGGCGTACGGCGTTTTTCAGTGCAGAAACTACCTCTCCATCAAAGACTGCCTCGCCTGCTTCGACATCGCCGCTGTTCAGATTTACAATAACTGCTCCGTCGCCGCCACCGGCGCTCGCCTTATTTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTTTCTTCTACGACCAGTCCGTAGACGGTGGCAACCACCTTATGTGTGGGAATCGTGTTGTTAAAAACTCCACCGAACTTGCTTCAACAGTGCAACAAGTCCTAAAGAATCTGGAATTAGCAACACCAAGAATCCCTGGGTACTTTGCAGCCACTATAACACAAGTACCTAACAGTAATGGTTCAAACATTTATGCCTTTGCTCAATGTCTCGAGACTCTCACTCAAAGTGGCTGCCAGGATTGTTTGGAGTCTGGGTTGAGAAATTTTCAGATTTGTCTTCCAAACTCAAATGCTAAGATTTTTTATGCTGGTTGTTTCATGAGATACTCCACCACTGCGTTTTTTGCTGCTAATCAGACCACTGATCTCAAGAACATCCTGAAACAAGGAGGTTCAACCAAGAAGAAGGCCATTATTGGTGGAGCCGTTGGAGGTGCATCTTTTATTTTGATTCTCTTTGCATTACTTGCTTTGTACAGACGATCATTGTCCAAGAGGGTTCATAGAGTTGACGTTTTGGGAGCAACTGAGTTGAAAGGCCCGGTTAACTACAGGTATAAAGATCTAAAGTCTGCAACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACACTAAAAAACGGAAAAGTAATTGCTATAAAGAAATTGGCTTTGGAGCAATCCAAAAAGATGGATGAAGATTTTGAGAGTGAGGTAAAGTTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTCGGATGTTGCAGCAAAGGCAAAGAGAGATTCCTTGTGTATGAGTACATGAGGAACAACAACGTTGGCCAATTCTTATTTGATTTTGGATTGGCAAGGCTTTTGCCAAGTGATCAATCTCATCTCAATACAAAATTTGCCGGGACGATGGGATACACTGCACCAGAGTACATAATGCATGGACAATTATCTGAGAAGGTTGATACCTATTGCTATGGTGTTGTAATCTTAGAGATCATGAGTGGGCAAAAGAGTGGTGAATTAAAGGATGATGATAGGGAATTCCTCCTTCAAAGAGCTTGGAAACTGTATGACAGAGAAATGCACATAGAGTTTGTGGACAAAACCTTAGACGCAAGTGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACACAAGCATCTCCTGCATCAAGGCCAACAATGTGTGAAGTTGTTGATATGCTGGAAAGCAAGGATGGCTTAATGGATCACAAGAGACCCACTATGCCTGTTTATGTTGATCCTAATCTGAGGCCTACTAGAGATATCTCTCAGTCTAGTAGTTCATCTTTATCAAATGCTACTGACTCCACTTCTATGCCATCAGGAAGGTGA 1794 0.4298 MLLHLQQKPLFIFLLSFTIWSWWTLDGVVSDPQLSYVKSGCSSYNVSDVTIFNENLNTTMRSLRAQISNQSKHSATAQAVKGNNPAYGVFQCRNYLSIKDCLACFDIAAVQIYNNCSVAATGARLIYEGCFLRYESSFFYDQSVDGGNHLMCGNRVVKNSTELASTVQQVLKNLELATPRIPGYFAATITQVPNSNGSNIYAFAQCLETLTQSGCQDCLESGLRNFQICLPNSNAKIFYAGCFMRYSTTAFFAANQTTDLKNILKQGGSTKKKAIIGGAVGGASFILILFALLALYRRSLSKRVHRVDVLGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGKVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGKERFLVYEYMRNNNVGQFLFDFGLARLLPSDQSHLNTKFAGTMGYTAPEYIMHGQLSEKVDTYCYGVVILEIMSGQKSGELKDDDREFLLQRAWKLYDREMHIEFVDKTLDASEYDAEEVKKIIEIGLLCTQASPASRPTMCEVVDMLESKDGLMDHKRPTMPVYVDPNLRPTRDISQSSSSSLSNATDSTSMPSGR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2231 597 Coils Coil 53 73 - -
Prci2g2231 597 ProSiteProfiles Protein kinase domain profile. 333 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2231 597 Gene3D - 33 139 IPR038408 -
Prci2g2231 597 Gene3D - 148 251 IPR038408 -
Prci2g2231 597 Pfam Protein tyrosine and serine/threonine kinase 336 419 IPR001245 GO:0004672|GO:0006468
Prci2g2231 597 Pfam Protein tyrosine and serine/threonine kinase 421 548 IPR001245 GO:0004672|GO:0006468
Prci2g2231 597 Pfam Salt stress response/antifungal 159 248 IPR002902 -
Prci2g2231 597 Pfam Salt stress response/antifungal 44 136 IPR002902 -
Prci2g2231 597 SUPERFAMILY Protein kinase-like (PK-like) 321 583 IPR011009 -
Prci2g2231 597 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Prci2g2231 597 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 421 - -
Prci2g2231 597 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2231 597 Gene3D Transferase(Phosphotransferase) domain 1 406 559 - -
Prci2g2231 597 FunFam Cysteine-rich receptor-like protein kinase 2 300 409 - -
Prci2g2231 597 MobiDBLite consensus disorder prediction 558 597 - -
Prci2g2231 597 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Prci2g2231 597 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Prci2g2231 597 MobiDBLite consensus disorder prediction 572 597 - -
Prci2g2231 597 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2231 Prci-Chr2 17342787 17350017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2231 2 597 Receptor kinase-like Gene Family AT1G70520 31.297 1.50e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2231 PK_Tyr_Ser-Thr 2.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2231 - - gmx:100813585 691.419