Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2230 ATGCAGCCGCAACTGCAACAAAAGCCTCTCTTCTTCTTTGTCTTCTTAAGCTTCATAATAATCTGGTCATGGGGGACTCTTGACGGCGTCGTTTCAGACCCTCAGACGAATCTAGTGCGACTGTGGTGCGATCAAGACGGCGACAATGATGGGTCCATCTTGAAGGAGATCCTCAACGAAACGTTTCGAGACCTGAGAGCTCAGATCGAAGACCAAAGCAAACTCTTCGGCACAGCTCAAGCAGTGAAGGCTAACATCGCCGTTTATGGCCTTTTTCAATGTAGAAACTACCTCTCCATAGCCGACTGTCTTGCTTGCTTTAACGTCGCCGCCGTGAACATCCGCAACTGCTCCGCCAGGGCTTACGGTGCTCGTCTCGTCTACGACGGCTGCTTCCTCAGGTACGAGAGCACTCAAGAATTCGATCAGGCCAGTGAAAGTTGGAACAACATAAGATGTGGGAATCAGACACTAAAAGATTCCCCTGCGCTTGCTTCAACTGTGCAACAAGTTCTGACAAATCTAGGCACAGCAACCCCCAGAATGCCAGGTTTCTATGCGGCCACTAAGACGGCCGTGCCTAATAGTAATGGCTTCAGTATTTATGCCATTGCTCAATGTGTTGAGACCCTCTCACAAAGTGGCTGCCAGAATTGCATCGACACTGCGTCAGGAAAATTTCAGACTTGTCTTACAACCTCAAATGCTGAGAGTTATGATACGGGCTGTTTCATGAGATACTCCACCAATGCTTTCTTCTCTGATAATCAAACCACTGATATCAACGGCTTCTTGAAGAAACAAGGTTCAAGCAATAAGGCATTCATCATTGGTATTGTTATTGGAGGTTTAATGCTTTTTTTGATCCTCCTTATTGCATTATTTGCCAGGATTAGGCCACGAAAAAGCCCAAAGAGGGTTCCCAAAGGAGACATTACTGGAATAAGCCAGTTGAAGGCCCCAGTTAATTACAATTATAAGGATTTGAAGTCTGCAACAAAAAATTTCAGCCTTGAAAATAAACTTGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAGAAATTAACTTTACGGCAATCCAAGAGGGTGGAGGAAGAATTTGAGAGTGAAGTAAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGTAGTAGAGGCAACAAGAGAATTCTGGTCTATGAATACATGGAAAAGACCAGTCTCGACAGATTCTTATTTGGAAAAAATAAAGGTTTTCTTAATTGGAAACAACGATATGATATAATTTTAGGAACAGCAAGAGGCTTGGCTTATCTTCATGAAGAATTTCATGTCTGTATCATTCATAGAGATATAAAGACTAACAACATTCTCATAGATGATGATTTACAACCTAAGATTGCTGATTTCGGCTTAGCGAGGCTCTTACCCGAGGACAAAACTCATCTCAATACAAGATTTGCTGGAACATTAGGATACACAGCACCAGAGTATGCGATTCATGGACAATTATCAGAGAAGGTTGATGTATATAGCTATGGTGTTGTAATCCTAGAAATCATTAGTGGTCGAAGAAATAATGAATTAAATGTCAACGGTGCTGCTGAAGGCGAATTCCTCCTTCAACAAGCTTGGAAGTTATATAAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTAGACCCTAATGATTATGATGTAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGGATCTGTAGAAATAAGGCCGAAAATGTCTGAAGTAGTTGCACTGCTCCAACAAAAGGGTTTATCAGAGGATATGAGACCCACTATGCCTATTTTGATTGAAATTAATTAG 1890 0.4185 MQPQLQQKPLFFFVFLSFIIIWSWGTLDGVVSDPQTNLVRLWCDQDGDNDGSILKEILNETFRDLRAQIEDQSKLFGTAQAVKANIAVYGLFQCRNYLSIADCLACFNVAAVNIRNCSARAYGARLVYDGCFLRYESTQEFDQASESWNNIRCGNQTLKDSPALASTVQQVLTNLGTATPRMPGFYAATKTAVPNSNGFSIYAIAQCVETLSQSGCQNCIDTASGKFQTCLTTSNAESYDTGCFMRYSTNAFFSDNQTTDINGFLKKQGSSNKAFIIGIVIGGLMLFLILLIALFARIRPRKSPKRVPKGDITGISQLKAPVNYNYKDLKSATKNFSLENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRQSKRVEEEFESEVKLISNVHHRNLVRLLGCCSRGNKRILVYEYMEKTSLDRFLFGKNKGFLNWKQRYDIILGTARGLAYLHEEFHVCIIHRDIKTNNILIDDDLQPKIADFGLARLLPEDKTHLNTRFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVILEIISGRRNNELNVNGAAEGEFLLQQAWKLYKRGIHIELVDDTLDPNDYDVEEVKKIIEIGLLCTQGSVEIRPKMSEVVALLQQKGLSEDMRPTMPILIEIN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2230 629 Gene3D Phosphorylase Kinase; domain 1 304 412 - -
Prci2g2230 629 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Prci2g2230 629 Pfam Salt stress response/antifungal 52 137 IPR002902 -
Prci2g2230 629 Coils Coil 55 75 - -
Prci2g2230 629 Gene3D - 146 252 IPR038408 -
Prci2g2230 629 Gene3D - 36 139 IPR038408 -
Prci2g2230 629 Gene3D Transferase(Phosphotransferase) domain 1 413 620 - -
Prci2g2230 629 ProSiteProfiles Protein kinase domain profile. 336 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2230 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Prci2g2230 629 FunFam Cysteine-rich receptor-like protein kinase 2 304 412 - -
Prci2g2230 629 ProSiteProfiles Gnk2-homologous domain profile. 146 252 IPR002902 -
Prci2g2230 629 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Prci2g2230 629 CDD STKc_IRAK 342 611 - -
Prci2g2230 629 FunFam Cysteine-rich receptor-like protein kinase 2 413 617 - -
Prci2g2230 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 624 - -
Prci2g2230 629 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Prci2g2230 629 Pfam Protein kinase domain 337 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2230 629 SMART serkin_6 336 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2230 629 SUPERFAMILY Protein kinase-like (PK-like) 317 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2230 Prci-Chr2 17313541 17317975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2230 5 612 Receptor kinase-like Gene Family AT1G70520 35.910 3.33e-121 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2230 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2230 - - gmx:100813585 763.066