Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2229 ATGCAGCCGCAACTGCAACAAAAGCCTCTCTTCTTCTTTGTCTTCTTAAGCTTCATAATAATCTGGTCATGGGGGACTCTTGACGGCGTCGTTTCAGACCCTCAGACGAATCTAGTGCGACTGTGGTGCGATCAAGACGGCGACAATGATGGGTCCATCTTGAAGGAGATCCTCAACGAAACGTTTCGAGACCTGAGAGCTCAGATCGAAGACCAAAGCAAACTCTTCGGCACAGCTCAAGCAGTGAAGGCTAACATCGCCGTTTATGGCCTTTTTCAATGTAGAAACTACCTCTCCATAGCCGACTGTCTTGCTTGCTTTAACGTCGCCGCCGTGAACATCCGCAACTGCTCCGCCAGGGCTTACGGTGCTCGTCTCGTCTACGACGGCTGCTTCCTCAGGTACGAGAGCACTCAAGAATTCGATCAGGCCAGTGAAAGTTGGAACAACATAAGATGTGGGAATCAGACACTAAAAGATTCCCCTGCGCTTGCTTCAACTGTGCAACAAGTTCTGACAAATCTAGGCACAGCAACCCCCAGAATGCCAGGTTTCTATGCGGCCACTAAGACGGCCGTGCCTAATAGTAATGGCTTCAGTATTTATGCCATTGCTCAATGTGTTGAGACCCTCTCACAAAGTGGCTGCCAGAATTGCATCGACACTGCGTCAGGAAAATTTCAGACTTGTCTTACAACCTCAAATGCTGAGAGTTATGATACGGGCTGTTTCATGAGATACTCCACCAATGCTTTCTTCTCTGATAATCAAACCACTGATATCAACGGCTTCTTGAAGAAACAAGGTTCAAGCAATAAGGCATTCATCATTGGTATTGTTATTGGAGGTTTAATGCTTTTTTTGATCCTCCTTATTGCATTATTTGCCAGGATTAGGCCACGAAAAAGCCCAAAGAGGGTTCCCAAAGGAGACATTACTGGAATAAGCCAGTTGAAGGCCCCAGTTAATTACAATTATAAGGATTTGAAGTCTGCAACAAAAAATTTCAGCCTTGAAAATAAACTTGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAGAAATTAACTTTACGGCAATCCAAGAGGGTGGAGGAAGAATTTGAGAGTGAAGTAAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGTAGTAGAGGCAACAAGAGAATTCTGGTCTATGAATACATGGAAAAGACCAGTCTCGACAGATTCTTATTTGATGATGATTTACAACCTAAGATTGCTGATTTCGGCTTAGCGAGGCTCTTACCCGAGGACAAAACTCATCTCAATACAAGATTTGCTGGAACATTAGGATACACAGCACCAGAGTATGCGATTCATGGACAATTATCAGAGAAGGTTGATGTATATAGCTATGGTGTTGTAATCCTAGAAATCATTAGTGGTCGAAGAAATAATGAATTAAATGTCAACGGTGCTGCTGAAGGCGAATTCCTCCTTCAACAAGCTTGGAAGTTATATAAGAGAGGCATACACATAGAGTTGGTGGATGATACCTTAGACCCTAATGATTATGATGTAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGGATCTGTAGAAATAAGGCCGAAAATGTCTGAAGTAGTTGCACTGCTCCAACAAAAGGGTTTATCAGAGGATATGAGACCCACTATGCCTATTTTGATTGAAATTAATTAG 1752 0.4281 MQPQLQQKPLFFFVFLSFIIIWSWGTLDGVVSDPQTNLVRLWCDQDGDNDGSILKEILNETFRDLRAQIEDQSKLFGTAQAVKANIAVYGLFQCRNYLSIADCLACFNVAAVNIRNCSARAYGARLVYDGCFLRYESTQEFDQASESWNNIRCGNQTLKDSPALASTVQQVLTNLGTATPRMPGFYAATKTAVPNSNGFSIYAIAQCVETLSQSGCQNCIDTASGKFQTCLTTSNAESYDTGCFMRYSTNAFFSDNQTTDINGFLKKQGSSNKAFIIGIVIGGLMLFLILLIALFARIRPRKSPKRVPKGDITGISQLKAPVNYNYKDLKSATKNFSLENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRQSKRVEEEFESEVKLISNVHHRNLVRLLGCCSRGNKRILVYEYMEKTSLDRFLFDDDLQPKIADFGLARLLPEDKTHLNTRFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVILEIISGRRNNELNVNGAAEGEFLLQQAWKLYKRGIHIELVDDTLDPNDYDVEEVKKIIEIGLLCTQGSVEIRPKMSEVVALLQQKGLSEDMRPTMPILIEIN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2229 583 FunFam Cysteine-rich receptor-like protein kinase 2 304 412 - -
Prci2g2229 583 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Prci2g2229 583 Pfam Salt stress response/antifungal 52 137 IPR002902 -
Prci2g2229 583 ProSiteProfiles Gnk2-homologous domain profile. 146 252 IPR002902 -
Prci2g2229 583 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Prci2g2229 583 Gene3D - 146 252 IPR038408 -
Prci2g2229 583 Gene3D - 36 139 IPR038408 -
Prci2g2229 583 Coils Coil 55 75 - -
Prci2g2229 583 ProSiteProfiles Protein kinase domain profile. 336 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2229 583 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Prci2g2229 583 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 422 578 - -
Prci2g2229 583 Gene3D Transferase(Phosphotransferase) domain 1 415 574 - -
Prci2g2229 583 SUPERFAMILY Protein kinase-like (PK-like) 321 566 IPR011009 -
Prci2g2229 583 Pfam Protein tyrosine and serine/threonine kinase 337 424 IPR001245 GO:0004672|GO:0006468
Prci2g2229 583 Gene3D Phosphorylase Kinase; domain 1 304 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2229 Prci-Chr2 17313541 17317975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2229 5 566 Receptor kinase-like Gene Family AT1G70520 31.401 1.84e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2229 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2229 - - gmx:100813585 654.44