Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2227 ATGCTTCTGAACCTGCAACAGAAACCCCCCTTCTTCTTCATCTTGTTGAGCTTCACGATCTGGTCATGGTGGACCCTTGACGGCGTCGTTTCAGACCCTCAGACAATTGCTGTGAGGCTAGGTTGCAGCCAAACCAATGTCAGTGACGTATCCATCTTCCAAGACAACCTAAACGCAACGTATCAGAACATTAGAACGCAGATCAGCAACCAAAGCAAACACTTCGCCACGGCGCAGGTAGTGAAGGGTAACAACCCTGCTTACGGCCTTTTTCAGTGCAGAAACTACCTCTCCATCGCCGACTGTCTCTCTTGCTTCGACTCTGCCGCCGGTTTGCTACGACACAACTGCTCCGCCGCCGTCAACGGCGCCCACCTCATATACGACGGTTGCTTCCTCAGGTACGAGAGCACTACCTTCTTTGACCAGTCCACAGACGCAGGCAACAACATTCATTGTGGAAATGAAACAAAAAATTCCACAGAACTTGCTTCAACTGTGCAACAAACGCTGAAGAATCTGGAAATAGCAACACCAAGAATTGCTGGTTACTTTGCAGCCACTAAAACGACAGTTCCTAACAGTAACGGTTCAACCATTTATGCCTTTGCTCAATGTGTTGAGGCTCTCACTCAAAGTGGCTGCGACAATTGCTTAAACATTGCCTTAAGAAATTTTCAGATTTGTCTCCCCAACTCAAATGCTAAGGCTTTTGATTTTGGCTGTTTCATGAGATACTCCACCACTGCCTTCTTCGCTGACAATCAAACCACTGATATCAATCACATCTTGAAACAAGGAGATTCAAGCAAGAAGGGGGCCATTATTGGTGGTCTCGTGGGAGGAGTATCTTTTATTTTGATTCTCTTTGCGTTGTTTGCTTTGTATAGTCGATCAAAGTCATCGAAGATGGTTCCTAAAGGTGACATTTTGGGATCAACTGAGTTAAAAGGTCCTGTTAACTTTAGGTATAGAGATCTAAAGTCAGCGACACAAAACTTCAGTGAAAAAAATAAACTAGGAGAAGAAGCTTTTGGTGATGTATACAAGGGTACTTTAAAAAATGGAAAAGTAGTTGCTATCAAGAAATTGGATTTAGGCCAATCCAGACAGATGGAGAAAGAATTTAAGAGTGAAGTAAAGTTGATAAGTAACGTTCATCATCGAAATATTGTTCGACTTTTGGGATGTTGCAACAAAGGCCAAGAGAGACTTCTTGTTTATGAGCACATGAAAAACAACGATGTTGGACAATTCCTTTTTGTGGTGCACATAGGTGAAAATAAAGACGCTCTCAGTTGGATGCAACGTTATGGGATAATTTTGGGCACTGCAAGGGGTTTGGCATATTTACATGAAGAATTTCATGTTTGCATCATACATAGAGATATAAAAACTAATAACATCTTCTTGGATGATGATTTCCAACCTAAAATTGCTAATTTTGGATTAGCGAGGCTTCTGACAAGAGATCAATCTCATCTCAATACAAATTTTGCTGGAACAATGGGATATGTAGCACCTGAATATGCAATGCATGGACAATTATCAGAAAAGGCTTGGAAACTGTACGAGAGAGGAATGCACATAGAGTTTGTGGACAAAAACTTAGACCCAAATGAGTATGATGCAGAAGAGATTAAGAAGATCATAGAGATTGGATTGCTTTGCACACAAGCATCACCCGCAGCAAGGCCAAAAATGTCTGAAATTGTTAGAATGCTCAAGAGAAAGAGCTTAATGGAGCACACACAACCCACTATGCCTGTCTATGTTGATCCTAGTTCTTGGCCCAAGAGAGAAACCTCTGTGTCTCATAGTTCGTCTTCATCAAATGCTACTGTCTCCGTTTCCATTCTATCAGGAAGGTGA 1872 0.4204 MLLNLQQKPPFFFILLSFTIWSWWTLDGVVSDPQTIAVRLGCSQTNVSDVSIFQDNLNATYQNIRTQISNQSKHFATAQVVKGNNPAYGLFQCRNYLSIADCLSCFDSAAGLLRHNCSAAVNGAHLIYDGCFLRYESTTFFDQSTDAGNNIHCGNETKNSTELASTVQQTLKNLEIATPRIAGYFAATKTTVPNSNGSTIYAFAQCVEALTQSGCDNCLNIALRNFQICLPNSNAKAFDFGCFMRYSTTAFFADNQTTDINHILKQGDSSKKGAIIGGLVGGVSFILILFALFALYSRSKSSKMVPKGDILGSTELKGPVNFRYRDLKSATQNFSEKNKLGEEAFGDVYKGTLKNGKVVAIKKLDLGQSRQMEKEFKSEVKLISNVHHRNIVRLLGCCNKGQERLLVYEHMKNNDVGQFLFVVHIGENKDALSWMQRYGIILGTARGLAYLHEEFHVCIIHRDIKTNNIFLDDDFQPKIANFGLARLLTRDQSHLNTNFAGTMGYVAPEYAMHGQLSEKAWKLYERGMHIEFVDKNLDPNEYDAEEIKKIIEIGLLCTQASPAARPKMSEIVRMLKRKSLMEHTQPTMPVYVDPSSWPKRETSVSHSSSSSNATVSVSILSGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2227 623 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Prci2g2227 623 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Prci2g2227 623 Gene3D - 148 251 IPR038408 -
Prci2g2227 623 Gene3D - 35 140 IPR038408 -
Prci2g2227 623 ProSiteProfiles Protein kinase domain profile. 334 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2227 623 FunFam Cysteine-rich receptor-like protein kinase 2 148 251 - -
Prci2g2227 623 FunFam Os07g0541700 protein 411 502 - -
Prci2g2227 623 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Prci2g2227 623 SUPERFAMILY Protein kinase-like (PK-like) 322 607 IPR011009 -
Prci2g2227 623 FunFam Cysteine-rich receptor-like protein kinase 2 299 410 - -
Prci2g2227 623 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Prci2g2227 623 Gene3D Transferase(Phosphotransferase) domain 1 517 590 - -
Prci2g2227 623 Gene3D Transferase(Phosphotransferase) domain 1 411 516 - -
Prci2g2227 623 MobiDBLite consensus disorder prediction 591 623 - -
Prci2g2227 623 SMART serkin_6 334 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2227 623 MobiDBLite consensus disorder prediction 598 623 - -
Prci2g2227 623 Gene3D Phosphorylase Kinase; domain 1 298 410 - -
Prci2g2227 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Prci2g2227 623 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 516 609 - -
Prci2g2227 623 Pfam Protein kinase domain 334 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2227 Prci-Chr2 17304751 17310829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2227 9 623 Receptor kinase-like Gene Family AT1G70520 34.639 6.29e-113 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2227 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2227 - - gmx:100813585 753.821