Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2221 ATGCTTCAACGTTCTTTTCTCCTTACCTTATTTTCCTTATTCTGGTCATGCTGTACTCTTCTTGACGGCGGCGTTTCAGACCCGCAAACTCATCTTCTCACCTTCGGATGCACACCATTTGACCAGTTCGTCATTTCCGACTTGTCCATCTTCAATGAGAACCTAAATGCAACGTTTCGAGACCTCAGAGGACAGATCAGAGACCAAAGCAAGCACTTCGGTACTGTTCAGGAAGGCAGTGGAGGAAGCCCCGTGTATACTCTTTTTCAGTGCAGAAACTACCTTTCAGTTGCTGACTGTGTCGCCTGCTTCGATGTAGCTGCCGTCCAAATCCGCAGCTGCCCCGCCGGTGCTCCTGGCGGCCATGTTGTCTACGACGGCTGCTTCCGCAGGTATGATGCCAGTCCTTTCTTTGACCGTCCGACGGATACTTTCAATGCTGCATTGTGTGGGAATAAAACTACAGAAGAAGCCACTGCGTTTACCTCAGCTGTGCAAAAACTGCTAATGAATCTGCAAAAAGAAACATCTACAATCCCTGGTTTTTTGGCAGCGATGAAGACGCATGTTCCTAATACTGGTCCAACTATACATACCTTTGTTCAGTGTACTGAAACTATCACACAGAGTGGGTGCCTCAATTGCTTAAATGTTGGATACAAGAATATGCAGACTTGTCTTCCCACGTCAGACGGTAGGGCTTTTGATCAAGGTTGTTTCTTAAGATACTCCACAACTTCATTCTTTCCTGATAATTACCAGATCATTGATGTCACTCCCATGGATAAACAAGGTTCGATCAATAAGGGGGCCATCATTGGTGGAGCAGTTGCTGGGAGTGTAATCCTTGCTTTGATTGTCCTGGCATTTTTTCTTTGGGCCAAGCCACCAAAAAATCCTAAAAGGGTTCCAGGTGGAGGAGACACAACCGGAGCAAGCAAGTTGAAAGGTCCAGTTAATTACAGTTACAAGGATTTGAAGCTTTCAACAAAAAATTTTAATGCAGATAATAAACTTGGACAAGGAGGATTTGGTACTGTATACGAGGGAACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAAAAGTTAACTTTACGCCATTCCACTAAAGTGGAGGATGAATTTGAGAGCGAAGTGAAACTTATAAGTAACGTTCATCATCGAAATCTTGTTCGACTTCTTGGATATTGCAGCAAAGACAATACAAGAATTCTTGTCTATGAATACATGAAAAATACCAGTCTTGACAAATTCTTATTTGAAATTATCAGTGGTCGAAAAAGTGAAGAATTGAACATCAATGGTGAAGCTGAAGGTGAATTCCTCCTTCAAAAGGCATGGAAACTGTATGAGAGAGGCAGGCATTTAGAGTTGGTGGACAATACTTTAGACCCTAATGACTGTGATATAGAAGAAGTAAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTCCTACAATAAGACCGACAATTTCTGAAGTTGTTGTCTTGCTCCAAAACAAGGGTTTATTTTAA 1524 0.4245 MLQRSFLLTLFSLFWSCCTLLDGGVSDPQTHLLTFGCTPFDQFVISDLSIFNENLNATFRDLRGQIRDQSKHFGTVQEGSGGSPVYTLFQCRNYLSVADCVACFDVAAVQIRSCPAGAPGGHVVYDGCFRRYDASPFFDRPTDTFNAALCGNKTTEEATAFTSAVQKLLMNLQKETSTIPGFLAAMKTHVPNTGPTIHTFVQCTETITQSGCLNCLNVGYKNMQTCLPTSDGRAFDQGCFLRYSTTSFFPDNYQIIDVTPMDKQGSINKGAIIGGAVAGSVILALIVLAFFLWAKPPKNPKRVPGGGDTTGASKLKGPVNYSYKDLKLSTKNFNADNKLGQGGFGTVYEGTLKNGKVVAVKKLTLRHSTKVEDEFESEVKLISNVHHRNLVRLLGYCSKDNTRILVYEYMKNTSLDKFLFEIISGRKSEELNINGEAEGEFLLQKAWKLYERGRHLELVDNTLDPNDCDIEEVKKIIEIGLLCTQASPTIRPTISEVVVLLQNKGLF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2221 507 FunFam Cysteine-rich receptor-like protein kinase 2 299 409 - -
Prci2g2221 507 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Prci2g2221 507 Pfam Salt stress response/antifungal 48 133 IPR002902 -
Prci2g2221 507 Pfam Protein tyrosine and serine/threonine kinase 335 421 IPR001245 GO:0004672|GO:0006468
Prci2g2221 507 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Prci2g2221 507 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2221 507 SUPERFAMILY Protein kinase-like (PK-like) 316 423 IPR011009 -
Prci2g2221 507 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 420 503 - -
Prci2g2221 507 Gene3D Transferase(Phosphotransferase) domain 1 414 505 - -
Prci2g2221 507 ProSiteProfiles Protein kinase domain profile. 333 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2221 507 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Prci2g2221 507 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Prci2g2221 507 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Prci2g2221 507 Gene3D - 38 137 IPR038408 -
Prci2g2221 507 Gene3D - 142 248 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2221 Prci-Chr2 17253834 17258099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2221 69 420 Receptor kinase-like Gene Family AT1G70530 34.078 4.28e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2221 PK_Tyr_Ser-Thr 1.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2221 - - pcin:129301902 1003.43