LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g2220	ATGCTTCAGCCTAATTTCGTCCCTTTAATCAGGACCTTTATATTCTGGTCATGGTGGACACTTAACGGCATCGTTTCGGATCCACAGATCAATCTTGTAAACAAAGGGTGCACTCCATCCACATTACTAACCTCAACCAACTTCTCCATCATCGAGAACAGCATAAACGCAACGTTTAGTGACATCAGAGATCAGATCATTACTCAGAACAAGTACTTCGCGACGGCGCAGCAAGGCAGCGGAGAATTCCCAGTATACAGTCTTTTTCAGTGCAGAAATTACCTCTCTATTCATGACTGTGTTACCTGTTTCGATGTTGCTGCCGTGGAAATCCGCAACTGCCCCGCCGTGGCACCCGGTGGCCGTGTTGTCTACGACGGCTGCTTCCTCAGGCACGAGATCAGTGATTTCTTTGAGGAGACAACGGATTTCAATGCCGTATCGTGTGGTAATCAAACTGCAACAGAATCCACCACATTTACCTCAATTGTGCAACAAGTTCTAATGAATCTGCAAACAACGTCACCAATGAAACAAGGGTTTTTTGCAGCCACAAAAGCAGAATTGCCTGAGAATGGTTCAACTATTTATGCGTTTGCTCAATGTACTGAAACTATCACGCAGAGTGGGTGCCTCAATTGCTTGAACAGTGGGTACAACAATATGCTTACTTGTTTTCCCAATTCTGATGGCAAAGCTTATGCTTCTGGGTGCTACATGAGATACTCCAACACTTCATTCTTCCCTGATAATTACCAGACCATTGATGTCACTCCGTTGTTAGGCAAACAAGGTTCAAGCAGCAATAAGAAAGGGGACATTATTGGTGGTGTTGTTGGAGGTGTAGCTTCTCTTTTGATCCTCTTTGCATTATTTACCTGGATTAGACGACCAAAAACCCCTAAGAAGATTCCCAGAGGAGAGATAATTGGAGCAAGCAAGCTAGACGGCCCAGTTACTTACAGTTATGGGGATTTGAAGTCTGCAACCAGTAATTTTAGCGAAGAAAATAAACTAGGACAAGGAGGGTTTGGTGTTGTATACAAGGGTATTCTGCAAAATGGAAAAGTAGTTGCAATCAAGAAATTAAATTTTCGCCAATTCACAAAGATGGAGGAAGATTTTGAAAGTGAAGTGAAGCTGATAAGTAATGTTCATCATCTAAATCTTGTTCGACTTCTAGGTTGTTGCAGTAAAGGGCACAACAGAATTCTTGTTTATGAATACATGAAAAACAACAGTCTTGACAAATTATTATTTGGTGAAAGAAAAGGTTCTCTCAACTGGAGGCAACGATATGATATAATTTTAGGAACGGCAAAGGGTTTGGCTTATCTTCATGAGGAATTTCATGTTTGTATCATACATAGAGATATAAAGACTAACAACATCCTCTTAGATGATAATCTACAACCTAGAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGAAGACAAATCTCATCTTAGCACAAAATTTGCAGGAACATTCCTCTATATACCGTGA	1509	0.4102	MLQPNFVPLIRTFIFWSWWTLNGIVSDPQINLVNKGCTPSTLLTSTNFSIIENSINATFSDIRDQIITQNKYFATAQQGSGEFPVYSLFQCRNYLSIHDCVTCFDVAAVEIRNCPAVAPGGRVVYDGCFLRHEISDFFEETTDFNAVSCGNQTATESTTFTSIVQQVLMNLQTTSPMKQGFFAATKAELPENGSTIYAFAQCTETITQSGCLNCLNSGYNNMLTCFPNSDGKAYASGCYMRYSNTSFFPDNYQTIDVTPLLGKQGSSSNKKGDIIGGVVGGVASLLILFALFTWIRRPKTPKKIPRGEIIGASKLDGPVTYSYGDLKSATSNFSEENKLGQGGFGVVYKGILQNGKVVAIKKLNFRQFTKMEEDFESEVKLISNVHHLNLVRLLGCCSKGHNRILVYEYMKNNSLDKLLFGERKGSLNWRQRYDIILGTAKGLAYLHEEFHVCIIHRDIKTNNILLDDNLQPRIADFGLARLLPEDKSHLSTKFAGTFLYIP	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g2220	502	Gene3D	Phosphorylase Kinase; domain 1	307	409	-	-
	Prci2g2220	502	SUPERFAMILY	Protein kinase-like (PK-like)	316	501	IPR011009	-
	Prci2g2220	502	ProSiteProfiles	Protein kinase domain profile.	333	502	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g2220	502	ProSiteProfiles	Gnk2-homologous domain profile.	30	137	IPR002902	-
	Prci2g2220	502	ProSitePatterns	Protein kinases ATP-binding region signature.	339	362	IPR017441	GO:0005524
	Prci2g2220	502	Pfam	Protein kinase domain	334	501	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g2220	502	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	87	501	-	-
	Prci2g2220	502	Gene3D	-	30	137	IPR038408	-
	Prci2g2220	502	Gene3D	-	141	247	IPR038408	-
	Prci2g2220	502	Gene3D	Transferase(Phosphotransferase) domain 1	410	502	-	-
	Prci2g2220	502	FunFam	Protein kinase superfamily protein	410	482	-	-
	Prci2g2220	502	FunFam	Cysteine-rich receptor-like protein kinase 2	144	247	-	-
	Prci2g2220	502	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	454	466	IPR008271	GO:0004672\|GO:0006468
	Prci2g2220	502	Pfam	Salt stress response/antifungal	49	133	IPR002902	-
	Prci2g2220	502	Pfam	Salt stress response/antifungal	149	244	IPR002902	-
	Prci2g2220	502	ProSiteProfiles	Gnk2-homologous domain profile.	142	247	IPR002902	-
	Prci2g2220	502	FunFam	Cysteine-rich receptor-like protein kinase 2	299	409	-	-
	Prci2g2220	502	SMART	serkin_6	333	501	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g2220	Prci-Chr2	17246169	17252932	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g2220	4	501	Receptor kinase-like Gene Family	AT1G70520	37.426	2.47e-92	293

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci2g2220		Pkinase	2.4e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g2220	-		-	pcin:129300003	730.324