Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2218 ATGCTTCAGCCTAATTTCGTCCCTTTAATCAGGACCTTTATATTCTGGTCATGGTGGACACTTAACGGCATCGTTTCGGATCCACAGATCAATCTTGTAAACAAAGGGTGCACTCCATCCACATTACTAACCTCAACCAACTTCTCCATCATCGAGAACAGCATAAACGCAACGTTTAGTGACATCAGAGATCAGATCATTACTCAGAACAAGTACTTCGCGACGGCGCAGCAAGGCAGCGGAGAATTCCCAGTATACAGTCTTTTTCAGTGCAGAAATTACCTCTCTATTCATGACTGTGTTACCTGTTTCGATGTTGCTGCCGTGGAAATCCGCAACTGCCCCGCCGTGGCACCCGGTGGCCGTGTTGTCTACGACGGCTGCTTCCTCAGGCACGAGATCAGTGATTTCTTTGAGGAGACAACGGATTTCAATGCCGTATCGTGTGGTAATCAAACTGCAACAGAATCCACCACATTTACCTCAATTGTGCAACAAGTTCTAATGAATCTGCAAACAACGTCACCAATGAAACAAGGGTTTTTTGCAGCCACAAAAGCAGAATTGCCTGAGAATGGTTCAACTATTTATGCGTTTGCTCAATGTACTGAAACTATCACGCAGAGTGGGTGCCTCAATTGCTTGAACAGTGGGTACAACAATATGCTTACTTGTTTTCCCAATTCTGATGGCAAAGCTTATGCTTCTGGGTGCTACATGAGATACTCCAACACTTCATTCTTCCCTGATAATTACCAGACCATTGATGTCACTCCGTTGTTAGGCAAACAAGGTTCAAGCAGCAATAAGAAAGGGGACATTATTGGTGGTGTTGTTGGAGGTGTAGCTTCTCTTTTGATCCTCTTTGCATTATTTACCTGGATTAGACGACCAAAAACCCCTAAGAAGATTCCCAGAGGAGAGATAATTGGAGCAAGCAAGCTAGACGGCCCAGTTACTTACAGTTATGGGGATTTGAAGTCTGCAACCAGTAATTTTAGCGAAGAAAATAAACTAGGACAAGGAGGGTTTGGTGTTGTATACAAGGGTATTCTGCAAAATGGAAAAGTAGTTGCAATCAAGAAATTAAATTTTCGCCAATTCACAAAGATGGAGGAAGATTTTGAAAGTGAAGTGAAGCTGATAAGTAATGTTCATCATCTAAATCTTGTTCGACTTCTAGGTTGTTGCAGTAAAGGGCACAACAGAATTCTTGTTTATGAATACATGAAAAACAACAGTCTTGACAAATTATTATTTGGTGAAAGAAAAGGTTCTCTCAACTGGAGGCAACGATATGATATAATTTTAGGAACGGCAAAGGGTTTGGCTTATCTTCATGAGGAATTTCATGTTTGTATCATACATAGAGATATAAAGACTAACAACATCCTCTTAGATGATAATCTACAACCTAGAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGAAGACAAATCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTACATAATTCATGGTCAATTATCAGAGAAGGCTGATATCTATAGTTATGGTGTTGTTGTTTTAGAAATTATTAGTGGTCGACAAAGCAAAGAATTAAATGTTGATGATGATGCTGATGGTGAATTCCTCCTTCAAAAAGCTTGGAAATTATACGAGAGAGGCATGCACCTCGAGTTGGTGGATAATACCTTGGACCCTAATGGGTATGATGCAGAAGAAGTGAAGAAAATCATGGAGATTGGTTTGCTTTGCACTCAAGCTTCTCCAGAAGCAAGGCCAATGATGTCTGAAGTAGTTGTTTTGCTCCAAAACAAGGATTTATTAGAGAATATGAAGCCCACTATGCCTATCTTGATTGAAACTAATTAA 1881 0.404 MLQPNFVPLIRTFIFWSWWTLNGIVSDPQINLVNKGCTPSTLLTSTNFSIIENSINATFSDIRDQIITQNKYFATAQQGSGEFPVYSLFQCRNYLSIHDCVTCFDVAAVEIRNCPAVAPGGRVVYDGCFLRHEISDFFEETTDFNAVSCGNQTATESTTFTSIVQQVLMNLQTTSPMKQGFFAATKAELPENGSTIYAFAQCTETITQSGCLNCLNSGYNNMLTCFPNSDGKAYASGCYMRYSNTSFFPDNYQTIDVTPLLGKQGSSSNKKGDIIGGVVGGVASLLILFALFTWIRRPKTPKKIPRGEIIGASKLDGPVTYSYGDLKSATSNFSEENKLGQGGFGVVYKGILQNGKVVAIKKLNFRQFTKMEEDFESEVKLISNVHHLNLVRLLGCCSKGHNRILVYEYMKNNSLDKLLFGERKGSLNWRQRYDIILGTAKGLAYLHEEFHVCIIHRDIKTNNILLDDNLQPRIADFGLARLLPEDKSHLSTKFAGTLGYTAPEYIIHGQLSEKADIYSYGVVVLEIISGRQSKELNVDDDADGEFLLQKAWKLYERGMHLELVDNTLDPNGYDAEEVKKIMEIGLLCTQASPEARPMMSEVVVLLQNKDLLENMKPTMPILIETN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2218 626 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2218 626 FunFam Cysteine-rich receptor-like protein kinase 2 410 614 - -
Prci2g2218 626 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Prci2g2218 626 ProSiteProfiles Gnk2-homologous domain profile. 30 137 IPR002902 -
Prci2g2218 626 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 624 - -
Prci2g2218 626 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2218 626 Pfam Protein kinase domain 334 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2218 626 CDD STKc_IRAK 339 608 - -
Prci2g2218 626 Gene3D - 141 247 IPR038408 -
Prci2g2218 626 Gene3D - 30 137 IPR038408 -
Prci2g2218 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Prci2g2218 626 SMART serkin_6 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2218 626 SUPERFAMILY Protein kinase-like (PK-like) 316 606 IPR011009 -
Prci2g2218 626 FunFam Cysteine-rich receptor-like protein kinase 2 144 247 - -
Prci2g2218 626 Gene3D Phosphorylase Kinase; domain 1 307 409 - -
Prci2g2218 626 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Prci2g2218 626 FunFam Cysteine-rich receptor-like protein kinase 2 299 409 - -
Prci2g2218 626 Pfam Salt stress response/antifungal 49 133 IPR002902 -
Prci2g2218 626 Pfam Salt stress response/antifungal 149 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2218 Prci-Chr2 17238585 17252925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2218 4 624 Receptor kinase-like Gene Family AT1G70520 38.073 4.13e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2218 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2218 - - pcin:129300003 950.658