Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2215 ATGCTTCCACCTAATTTCGTTTCTTTAATCATCACCTTCATCGTATTCTGGTCATGGTGGACGCTTGACGGCGTCGTTTCTGATCCCCAGACCCATCTTGTAAGGCCAGGGTGCACCCCATCCGAATTGCCACACTCGACCAACTTCTCCGGCATGGAGGACAGTTTAAACGCAACGTTTAGAGACATCAGAGAGCAGATCATCACTCAGAACAAGTATTTCGCGACGGCACAAGAAGGAAGAGGAGAAAGCCCTGCAATTTCCACTCTTTTTCAGTGCAGAAATTACCTCTCCGTTCATGACTGTGTTGCCTGCTTTGACGTTGCTGCCATTGAAATTCGCCACTGCCCCGCTGCGGCACTTGGTGGTGGCCGTGTTTTCTACGACGGCTGCTTCCTCAGGTATGAGACCAGCGCTTTCTTCGACCAAACGACATCGTCTTTCAATACCGCATCATGTGGTGGAAATCAGACTAAAGGAGAAGCCTCTACATTTACCTCTGCTGTGCGACAACAGCTAATGAATCTCCAAATGACAATACCCAAAATCTCTGGCTCTTTCGCAGCCATGAAGACGCAAGTGCCTAATAATGGTCCAACTATATATGCCTTTGCTCAATGTATTGAAACTGTCACAGAGAGTGGGTGCTTCAATTGCTTAAATGCAGCGTCTAGCAATATGCCAACTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGCTGATGGCTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAGACCATTGGTATCACTCCCTTGAAAAAACAAGGTTCGAGCAATAAGGGGGCCATCATTGGTGGAGTAGTTGCTGGGAGTGTAATCCTTGCTTTGATTGTCCTGGCATTTTTTCTTTGGGCCAAGCCACCAAAAAATCCTAAAAGGGTTCCAGGTGGAGGAGACACAACCGGAGCAAGCAAGTTGAAAGGTCCGGTTAATTACAGTTACAAGGATTTGAAGCTTTCAACAAAAAATTTTAATGCAGATAATAAACTTGGACAAGGAGGATTTGGTACTGTATACAAGGGAACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAAAAGTTAACTTTACGCCATTCCAATAAAGTGGAGGATGAATTTGAGAGCGAAGTGAAACTTATAAGTAACGTTCATCATCGAAATCTTGTTCGACTTCTTGGATATTGCAGCAAAGACAATACAAGAATTCTTGTCTATGAATACATGAAAAATACCAGTCTTGACAAATTCTTATTTGGTGAAATGAAAGGTTTTCTTGGTTGGAAGCAACGGTATGATATAATTTTAGGCACAGCAAGAGGTTTGGCTTATCTACACGAGGAATTCCATATTTGTATTATACATAGAGATATAAAGTCTAATAACATCCTCTTGGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTAGCAAAACTTCTATCTGAGGACAAATCTCATCTGAGCACAAAATTTGCAGGAACCTTAGGATATACAGCACCGGAATATGCATTAAATGGCCAATTATCTGAGAAGGCTGATGTCTATAGCTATGGTGTTGTGATCCTAGAAATTATTAGTGGTCGAAAAAGTGAAGAATTGAATATGAATGGTGAAGCTGAAGGTGAATTCCTCCTTCAAAAGGTAATGAAATTCATGCATGGAAACTGTATGAGAGAGGCAGGCATTTAG 1707 0.4206 MLPPNFVSLIITFIVFWSWWTLDGVVSDPQTHLVRPGCTPSELPHSTNFSGMEDSLNATFRDIREQIITQNKYFATAQEGRGESPAISTLFQCRNYLSVHDCVACFDVAAIEIRHCPAAALGGGRVFYDGCFLRYETSAFFDQTTSSFNTASCGGNQTKGEASTFTSAVRQQLMNLQMTIPKISGSFAAMKTQVPNNGPTIYAFAQCIETVTESGCFNCLNAASSNMPTCLPNSDGRAFADGCFMRYSTTSFFPDNQTIGITPLKKQGSSNKGAIIGGVVAGSVILALIVLAFFLWAKPPKNPKRVPGGGDTTGASKLKGPVNYSYKDLKLSTKNFNADNKLGQGGFGTVYKGTLKNGKVVAVKKLTLRHSNKVEDEFESEVKLISNVHHRNLVRLLGYCSKDNTRILVYEYMKNTSLDKFLFGEMKGFLGWKQRYDIILGTARGLAYLHEEFHICIIHRDIKSNNILLDDDFQPKIADFGLAKLLSEDKSHLSTKFAGTLGYTAPEYALNGQLSEKADVYSYGVVILEIISGRKSEELNMNGEAEGEFLLQKVMKFMHGNCMREAGI 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2215 568 Gene3D Transferase(Phosphotransferase) domain 1 413 566 - -
Prci2g2215 568 FunFam Cysteine-rich receptor-like protein kinase 2 302 412 - -
Prci2g2215 568 Gene3D - 145 252 IPR038408 -
Prci2g2215 568 Gene3D - 34 140 IPR038408 -
Prci2g2215 568 ProSiteProfiles Gnk2-homologous domain profile. 34 140 IPR002902 -
Prci2g2215 568 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 558 - -
Prci2g2215 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Prci2g2215 568 Pfam Protein kinase domain 337 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2215 568 SUPERFAMILY Protein kinase-like (PK-like) 324 535 IPR011009 -
Prci2g2215 568 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 413 565 - -
Prci2g2215 568 FunFam Cysteine-rich receptor-like protein kinase 2 149 252 - -
Prci2g2215 568 SMART serkin_6 336 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2215 568 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Prci2g2215 568 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Prci2g2215 568 ProSiteProfiles Protein kinase domain profile. 336 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2215 568 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Prci2g2215 568 Pfam Salt stress response/antifungal 47 137 IPR002902 -
Prci2g2215 568 CDD STKc_IRAK 342 535 - -
Prci2g2215 568 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2215 Prci-Chr2 17206057 17226011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2215 3 542 Receptor kinase-like Gene Family AT1G70520 37.638 1.45e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2215 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2215 - - gmx:100811953 682.945