Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2213 ATGCTTCCACCTAATTTCGTTTCTTTAATCATCACCTTCATCGTATTCTGGTCATGGTGGACGCTTGACGGCGTCGTTTCTGATCCCCAGACCCATCTTGTAAGGCCAGGGTGCACCCCATCCGAATTGCCACACTCGACCAACTTCTCCGGCATGGAGGACAGTTTAAACGCAACGTTTAGAGACATCAGAGAGCAGATCATCACTCAGAACAAGTATTTCGCGACGGCACAAGAAGGAAGAGGAGAAAGCCCTGCAATTTCCACTCTTTTTCAGTGCAGAAATTACCTCTCCGTTCATGACTGTGTTGCCTGCTTTGACGTTGCTGCCATTGAAATTCGCCACTGCCCCGCTGCGGCACTTGGTGGTGGCCGTGTTTTCTACGACGGCTGCTTCCTCAGGTATGAGACCAGCGCTTTCTTCGACCAAACGACATCGTCTTTCAATACCGCATCATGTGGTGGAAATCAGACTAAAGGAGAAGCCTCTACATTTACCTCTGCTGTGCGACAACAGCTAATGAATCTCCAAATGACAATACCCAAAATCTCTGGCTCTTTCGCAGCCATGAAGACGCAAGTGCCTAATAATGGTCCAACTATATATGCCTTTGCTCAATGTATTGAAACTGTCACAGAGAGTGGGTGCTTCAATTGCTTAAATGCAGCGTCTAGCAATATGCCAACTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGCTGATGGCTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAGACCATTGGTATCACTCCCTTGAAAAAACAAGGTTCGAGCAATAAGGGGGCCATCATTGGTGGAGTAGTTGCTGGGAGTGTAATCCTTGCTTTGATTGTCCTGGCATTTTTTCTTTGGGCCAAGCCACCAAAAAATCCTAAAAGGGTTCCAGGTGGAGGAGACACAACCGGAGCAAGCAAGTTGAAAGGTCCGGTTAATTACAGTTACAAGGATTTGAAGCTTTCAACAAAAAATTTTAATGCAGATAATAAACTTGGACAAGGAGGATTTGGTACTGTATACAAGGGAACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAAAAGTTAACTTTACGCCATTCCAATAAAGTGGAGGATGAATTTGAGAGCGAAGTGAAACTTATAAGTAACGTTCATCATCGAAATCTTGTTCGACTTCTTGGATATTGCAGCAAAGACAATACAAGAATTCTTGTCTATGAATACATGAAAAATACCAGTCTTGACAAATTCTTATTTGGTGAAATGAAAGGTTTTCTTGGTTGGAAGCAACGGTATGATATAATTTTAGGCACAGCAAGAGGTTTGGCTTATCTACACGAGGAATTCCATATTTGTATTATACATAGAGATATAAAGTCTAATAACATCCTCTTGGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTAGCAAAACTTCTATCTGAGGACAAATCTCATCTGAGCACAAAATTTGCAGGAACCTTAGGATATACAGCACCGGAATATGCATTAAATGGCCAATTATCTGAGAAGGCTGATGTCTATAGCTATGGTGTTGTGATCCTAGAAATTATTAGTGGTCGAAAAAGTGAAGAATTGAATATGAATGGTGAAGCTGAAGGTGAATTCCTCCTTCAAAAGGCATGGAAACTGTATGAGAGAGGCAGGCATTTAGAGTTGGTGGACAATACTTTAGACCCTATTGACTATGCTGTAGAAGAAGTAAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTCCTACAATAAGGCCGACAACGTCTGAAGTTGTTGTCTTGCTCCAAAACAAGGGTTTATTTGAAAATATGAGACCCACTATGCCTTTCTTGGTTGAAACTAATTAA 1890 0.4175 MLPPNFVSLIITFIVFWSWWTLDGVVSDPQTHLVRPGCTPSELPHSTNFSGMEDSLNATFRDIREQIITQNKYFATAQEGRGESPAISTLFQCRNYLSVHDCVACFDVAAIEIRHCPAAALGGGRVFYDGCFLRYETSAFFDQTTSSFNTASCGGNQTKGEASTFTSAVRQQLMNLQMTIPKISGSFAAMKTQVPNNGPTIYAFAQCIETVTESGCFNCLNAASSNMPTCLPNSDGRAFADGCFMRYSTTSFFPDNQTIGITPLKKQGSSNKGAIIGGVVAGSVILALIVLAFFLWAKPPKNPKRVPGGGDTTGASKLKGPVNYSYKDLKLSTKNFNADNKLGQGGFGTVYKGTLKNGKVVAVKKLTLRHSNKVEDEFESEVKLISNVHHRNLVRLLGYCSKDNTRILVYEYMKNTSLDKFLFGEMKGFLGWKQRYDIILGTARGLAYLHEEFHICIIHRDIKSNNILLDDDFQPKIADFGLAKLLSEDKSHLSTKFAGTLGYTAPEYALNGQLSEKADVYSYGVVILEIISGRKSEELNMNGEAEGEFLLQKAWKLYERGRHLELVDNTLDPIDYAVEEVKKIIEIGLLCTQASPTIRPTTSEVVVLLQNKGLFENMRPTMPFLVETN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2213 629 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Prci2g2213 629 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Prci2g2213 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 623 - -
Prci2g2213 629 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2213 629 FunFam Cysteine-rich receptor-like protein kinase 2 413 617 - -
Prci2g2213 629 ProSiteProfiles Gnk2-homologous domain profile. 34 140 IPR002902 -
Prci2g2213 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Prci2g2213 629 FunFam Cysteine-rich receptor-like protein kinase 2 149 252 - -
Prci2g2213 629 SMART serkin_6 336 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2213 629 Gene3D - 145 252 IPR038408 -
Prci2g2213 629 Gene3D - 35 140 IPR038408 -
Prci2g2213 629 CDD STKc_IRAK 342 611 - -
Prci2g2213 629 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Prci2g2213 629 ProSiteProfiles Protein kinase domain profile. 336 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2213 629 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Prci2g2213 629 FunFam Cysteine-rich receptor-like protein kinase 2 302 412 - -
Prci2g2213 629 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Prci2g2213 629 Pfam Salt stress response/antifungal 47 137 IPR002902 -
Prci2g2213 629 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2213 Prci-Chr2 17205689 17226009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2213 3 627 Receptor kinase-like Gene Family AT1G70520 36.551 5.28e-121 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2213 Pkinase 4.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2213 - - pcin:129300003 788.489