Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2212 ATGCTTCCACCTAATTTCGTTTCTTTAATCATCACCTTCATCGTATTCTGGTCATGGTGGACGCTTGACGGCGTCGTTTCTGATCCCCAGACCCATCTTGTAAGGCCAGGGTGCACCCCATCCGAATTGCCACACTCGACCAACTTCTCCGGCATGGAGGACAGTTTAAACGCAACGTTTAGAGACATCAGAGAGCAGATCATCACTCAGAACAAGTATTTCGCGACGGCACAAGAAGGAAGAGGAGAAAGCCCTGCAATTTCCACTCTTTTTCAGTGCAGAAATTACCTCTCCGTTCATGACTGTGTTGCCTGCTTTGACGTTGCTGCCATTGAAATTCGCCACTGCCCCGCTGCGGCACTTGGTGGTGGCCGTGTTTTCTACGACGGCTGCTTCCTCAGGTATGAGACCAGCGCTTTCTTCGACCAAACGACATCGTCTTTCAATACCGCATCATGTGGTGGAAATCAGACTAAAGGAGAAGCCTCTACATTTACCTCTGCTGTGCGACAACAGCTAATGAATCTCCAAATGACAATACCCAAAATCTCTGGCTCTTTCGCAGCCATGAAGACGCAAGTGCCTAATAATGGTCCAACTATATATGCCTTTGCTCAATGTATTGAAACTGTCACAGAGAGTGGGTGCTTCAATTGCTTAAATGCAGCGTCTAGCAATATGCCAACTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGCTGATGGCTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAGACCATTGGTATCACTCCCTTGAAAAAACAAGGTTCGAGCAATAAGGGGGCCATCATTGGTGGAGTAGTTGCTGGGAGTGTAATCCTTGCTTTGATTGTCCTGGCATTTTTTCTTTGGGCCAAGCCACCAAAAAATCCTAAAAGGGTTCCAGGTGGAGGAGACACAACCGGAGCAAGCAAGTTGAAAGGTCCGGTTAATTACAGTTACAAGGATTTGAAGCTTTCAACAAAAAATTTTAATGCAGATAATAAACTTGGACAAGGAGGATTTGGTACTGTATACAAGGGAACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAAAAGTTAACTTTACGCCATTCCAATAAAGTGGAGGATGAATTTGAGAGCGAAGTGAAACTTATAAGTAACGTTCATCATCGAAATCTTGTTCGACTTCTTGGATATTGCAGCAAAGACAATACAAGAATTCTTGTCTATGAATACATGAAAAATACCAGTCTTGACAAATTCTTATTTGGTGAAATGAAAGGTTTTCTTGGTTGGAAGCAACGGTATGATATAATTTTAGGCACAGCAAGAGGTTTGGCTTATCTACACGAGGAATTCCATATTTGTATTATACATAGAGATATAAAGTCTAATAACATCCTCTTGGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTAGCAAAACTTCTATCTGAGGACAAATCTCATCTGAGCACAAAATTTGCAGGAACCTTAGGATATACAGCACCGGAATATGCATTAAATGGCCAATTATCTGAGAAGGCTGATGTCTATAGCTATGGTGTTGTGATCCTAGAAATTATTAGTGGTCGAAAAAGTGAAGAATTGAATATGAATGGTGAAGCTGAAGGTGAATTCCTCCTTCAAAAGGTAATGAAATTCATGCATTTAGAGTTGGTGGACAATACTTTAGACCCTATTGACTATGCTGTAGAAGAAGTAAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTCCTACAATAAGGCCGACAACGTCTGAAGTTGTTGTCTTGCTCCAAAACAAGGGTTTATTTGAAAATATGAGACCCACTATGCCTTTCTTGGTTGAAACTAATTAA 1878 0.4148 MLPPNFVSLIITFIVFWSWWTLDGVVSDPQTHLVRPGCTPSELPHSTNFSGMEDSLNATFRDIREQIITQNKYFATAQEGRGESPAISTLFQCRNYLSVHDCVACFDVAAIEIRHCPAAALGGGRVFYDGCFLRYETSAFFDQTTSSFNTASCGGNQTKGEASTFTSAVRQQLMNLQMTIPKISGSFAAMKTQVPNNGPTIYAFAQCIETVTESGCFNCLNAASSNMPTCLPNSDGRAFADGCFMRYSTTSFFPDNQTIGITPLKKQGSSNKGAIIGGVVAGSVILALIVLAFFLWAKPPKNPKRVPGGGDTTGASKLKGPVNYSYKDLKLSTKNFNADNKLGQGGFGTVYKGTLKNGKVVAVKKLTLRHSNKVEDEFESEVKLISNVHHRNLVRLLGYCSKDNTRILVYEYMKNTSLDKFLFGEMKGFLGWKQRYDIILGTARGLAYLHEEFHICIIHRDIKSNNILLDDDFQPKIADFGLAKLLSEDKSHLSTKFAGTLGYTAPEYALNGQLSEKADVYSYGVVILEIISGRKSEELNMNGEAEGEFLLQKVMKFMHLELVDNTLDPIDYAVEEVKKIIEIGLLCTQASPTIRPTTSEVVVLLQNKGLFENMRPTMPFLVETN 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2212 625 FunFam Cysteine-rich receptor-like protein kinase 2 149 252 - -
Prci2g2212 625 ProSiteProfiles Protein kinase domain profile. 336 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2212 625 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Prci2g2212 625 Pfam Protein kinase domain 337 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2212 625 Gene3D Transferase(Phosphotransferase) domain 1 413 614 - -
Prci2g2212 625 FunFam Cysteine-rich receptor-like protein kinase 2 413 613 - -
Prci2g2212 625 ProSiteProfiles Gnk2-homologous domain profile. 34 140 IPR002902 -
Prci2g2212 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Prci2g2212 625 Gene3D - 35 140 IPR038408 -
Prci2g2212 625 Gene3D - 145 252 IPR038408 -
Prci2g2212 625 CDD STKc_IRAK 342 607 - -
Prci2g2212 625 FunFam Cysteine-rich receptor-like protein kinase 2 302 412 - -
Prci2g2212 625 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Prci2g2212 625 Pfam Salt stress response/antifungal 47 137 IPR002902 -
Prci2g2212 625 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Prci2g2212 625 SMART serkin_6 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2212 625 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Prci2g2212 625 SUPERFAMILY Protein kinase-like (PK-like) 324 615 IPR011009 -
Prci2g2212 625 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2212 Prci-Chr2 17205689 17226010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2212 3 623 Receptor kinase-like Gene Family AT1G70520 35.918 1.67e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2212 Pkinase 4.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2212 - - pcin:129300003 768.459