Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2210 ATGATGCTTCGGTGTCCCATTACCTTATTTATCCTCATATTCTGGTCATGCTGGATTCTTAATGGCGTCGTTTCGGACCCTCAGACCAATCTTCTAAAGAGAGGGTGCAGCCCACCGAACCAGTTCGTGGTGTCCAACTACACGATCTTCAATGAAAGCCTAAACTCAACGCTGCGAGAAATCGAACAACAGATCGGTGATCAAAACAAGCACTCCGCCACCGCACGGCGAGGCAACGGAGGAAGCCCTATTTCCACTCTTTTCCAATGCAGAAACTATCTCTCCGTTGCTGACTGTGGCAGGTGCCTAGACATCGCTGCCGAACAAATCCGCAACTGCTCCGCCGGGTCCTACGGTGGTCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTATGGCGAGACGACAGGGTCTTTGACTAAAGTATTGTATGGTGATCAGAATGCCAGAGAAGCCATTGCATTCACTGAAACTGCACAAAATTTGCTAATGAATCTCCAAACAGCAACACCCAGAATTTCAGGATTCTTTGCAGCCACAAAGATGCAAGTGCCTAATAATGGTGAAACTATTTATGCCTTTGCCCAGTGTGTTAATACTGTCACGCAAGGTGGTTGTCTAGATTTCGTAACGACTGGGTATAGCAATATGCAGATTTGCTTTACCTATTCAGAGGGTAGGGCTTTTGATGCTGGTTCTTTTATGAGATATTCAACCACTTCTTTCTTTGCTGATAATCAGACTATTGATATCACTCCCTTGGTCAAACCAGATTCATCAAGCAATAAGGCGACAATTATTGGCGGAGTTGTTGGAGGCGTAGCACTTGCTCTGATCCTCCTTGCATTATTTGCTTGGATTAGACGACCAAAAAGCCCCAAGAGAGTTCCTAGAGGAGATATAACTGAAACAAGTAAGTTGAAAGGCCCAGTTACTTATAGTTATCAGGATTTGAAGTCTGCAACCAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTATTGTATACAAGGGCACGCTAAGGAATGGCAAAGCAGTTGCAGTTAAGAAATTAACTTCTCAACACTTGAGTAGAGTGGACGAAGATTTTGAAAGTGAAGTGAAGCTCATAAATAATGTTCATCATCGAAATCTTGTTCGACTTTTGGGATGTTGTAGTAAAGGCCATGACAGATTCCTTGTTTATGAATACATGAAAAACAATAGTCTTGAAAAGTTCTTATTCGGTACTACATTTCAATCAACTAACAATTTATATGCTGCTTTTTACATGCATCATCCACAATATTTCATAGCATAA 1326 0.4238 MMLRCPITLFILIFWSCWILNGVVSDPQTNLLKRGCSPPNQFVVSNYTIFNESLNSTLREIEQQIGDQNKHSATARRGNGGSPISTLFQCRNYLSVADCGRCLDIAAEQIRNCSAGSYGGHVVYDGCFLRYEAGDFYGETTGSLTKVLYGDQNAREAIAFTETAQNLLMNLQTATPRISGFFAATKMQVPNNGETIYAFAQCVNTVTQGGCLDFVTTGYSNMQICFTYSEGRAFDAGSFMRYSTTSFFADNQTIDITPLVKPDSSSNKATIIGGVVGGVALALILLALFAWIRRPKSPKRVPRGDITETSKLKGPVTYSYQDLKSATKNFSDENKLGEGGFGIVYKGTLRNGKAVAVKKLTSQHLSRVDEDFESEVKLINNVHHRNLVRLLGCCSKGHDRFLVYEYMKNNSLEKFLFGTTFQSTNNLYAAFYMHHPQYFIA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2210 441 ProSiteProfiles Protein kinase domain profile. 330 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2210 441 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Prci2g2210 441 Gene3D Phosphorylase Kinase; domain 1 303 406 - -
Prci2g2210 441 FunFam Cysteine-rich receptor-like protein kinase 2 296 406 - -
Prci2g2210 441 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Prci2g2210 441 Pfam Salt stress response/antifungal 46 132 IPR002902 -
Prci2g2210 441 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Prci2g2210 441 Pfam Protein tyrosine and serine/threonine kinase 333 418 IPR001245 GO:0004672|GO:0006468
Prci2g2210 441 SUPERFAMILY Protein kinase-like (PK-like) 303 424 IPR011009 -
Prci2g2210 441 SMART tyrkin_6 330 440 IPR020635 GO:0004713|GO:0006468
Prci2g2210 441 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Prci2g2210 441 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 419 - -
Prci2g2210 441 Coils Coil 51 71 - -
Prci2g2210 441 Gene3D - 29 136 IPR038408 -
Prci2g2210 441 Gene3D - 142 247 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2210 Prci-Chr2 17148372 17151559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2210 78 417 Receptor kinase-like Gene Family AT1G70530 33.143 5.49e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2210 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2210 - - pcin:129300003 511.531