Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2209 ATGATGCTTCGGTGTCCCATTACCTTATTTATCCTCATATTCTGGTCATGCTGGATTCTTAATGGCGTCGTTTCGGACCCTCAGACCAATCTTCTAAAGAGAGGGTGCAGCCCACCGAACCAGTTCGTGGTGTCCAACTACACGATCTTCAATGAAAGCCTAAACTCAACGCTGCGAGAAATCGAACAACAGATCGGTGATCAAAACAAGCACTCCGCCACCGCACGGCGAGGCAACGGAGGAAGCCCTATTTCCACTCTTTTCCAATGCAGAAACTATCTCTCCGTTGCTGACTGTGGCAGGTGCCTAGACATCGCTGCCGAACAAATCCGCAACTGCTCCGCCGGGTCCTACGGTGGTCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTATGGCGAGACGACAGGGTCTTTGACTAAAGTATTGTATGGTGATCAGAATGCCAGAGAAGCCATTGCATTCACTGAAACTGCACAAAATTTGCTAATGAATCTCCAAACAGCAACACCCAGAATTTCAGGATTCTTTGCAGCCACAAAGATGCAAGTGCCTAATAATGGTGAAACTATTTATGCCTTTGCCCAGTGTGTTAATACTGTCACGCAAGGTGGTTGTCTAGATTTCGTAACGACTGGGTATAGCAATATGCAGATTTGCTTTACCTATTCAGAGGGTAGGGCTTTTGATGCTGGTTCTTTTATGAGATATTCAACCACTTCTTTCTTTGCTGATAATCAGACTATTGATATCACTCCCTTGGTCAAACCAGATTCATCAAGCAATAAGGCGACAATTATTGGCGGAGTTGTTGGAGGCGTAGCACTTGCTCTGATCCTCCTTGCATTATTTGCTTGGATTAGACGACCAAAAAGCCCCAAGAGAGTTCCTAGAGGAGATATAACTGAAACAAGTAAGTTGAAAGGCCCAGTTACTTATAGTTATCAGGATTTGAAGTCTGCAACCAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTATTGTATACAAGGGCACGCTAAGGAATGGCAAAGCAGTTGCAGTTAAGAAATTAACTTCTCAACACTTGAGTAGAGTGGACGAAGATTTTGAAAGTGAAGTGAAGCTCATAAATAATGTTCATCATCGAAATCTTGTTCGACTTTTGGGATGTTGTAGTAAAGGCCATGACAGATTCCTTGTTTATGAATACATGAAAAACAATAGTCTTGAAAAGTTCTTATTCGGAAAAAAAGAAAGGTTCTCTTGA 1275 0.4298 MMLRCPITLFILIFWSCWILNGVVSDPQTNLLKRGCSPPNQFVVSNYTIFNESLNSTLREIEQQIGDQNKHSATARRGNGGSPISTLFQCRNYLSVADCGRCLDIAAEQIRNCSAGSYGGHVVYDGCFLRYEAGDFYGETTGSLTKVLYGDQNAREAIAFTETAQNLLMNLQTATPRISGFFAATKMQVPNNGETIYAFAQCVNTVTQGGCLDFVTTGYSNMQICFTYSEGRAFDAGSFMRYSTTSFFADNQTIDITPLVKPDSSSNKATIIGGVVGGVALALILLALFAWIRRPKSPKRVPRGDITETSKLKGPVTYSYQDLKSATKNFSDENKLGEGGFGIVYKGTLRNGKAVAVKKLTSQHLSRVDEDFESEVKLINNVHHRNLVRLLGCCSKGHDRFLVYEYMKNNSLEKFLFGKKERFS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2209 424 Gene3D Phosphorylase Kinase; domain 1 303 406 - -
Prci2g2209 424 Pfam Protein tyrosine and serine/threonine kinase 333 419 IPR001245 GO:0004672|GO:0006468
Prci2g2209 424 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Prci2g2209 424 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Prci2g2209 424 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 421 - -
Prci2g2209 424 FunFam Cysteine-rich receptor-like protein kinase 2 296 406 - -
Prci2g2209 424 Gene3D - 142 247 IPR038408 -
Prci2g2209 424 Gene3D - 29 136 IPR038408 -
Prci2g2209 424 ProSiteProfiles Protein kinase domain profile. 330 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2209 424 Pfam Salt stress response/antifungal 46 132 IPR002902 -
Prci2g2209 424 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Prci2g2209 424 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Prci2g2209 424 SUPERFAMILY Protein kinase-like (PK-like) 303 421 IPR011009 -
Prci2g2209 424 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2209 Prci-Chr2 17148359 17151558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2209 78 421 Receptor kinase-like Gene Family AT1G70530 33.051 7.39e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2209 PK_Tyr_Ser-Thr 7.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2209 - - pcin:129300003 511.531