Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2208 ATGATGCTTCGGTGTCCCATTACCTTATTTATCCTCATATTCTGGTCATGCTGGATTCTTAATGGCGTCGTTTCGGACCCTCAGACCAATCTTCTAAAGAGAGGGTGCAGCCCACCGAACCAGTTCGTGGTGTCCAACTACACGATCTTCAATGAAAGCCTAAACTCAACGCTGCGAGAAATCGAACAACAGATCGGTGATCAAAACAAGCACTCCGCCACCGCACGGCGAGGCAACGGAGGAAGCCCTATTTCCACTCTTTTCCAATGCAGAAACTATCTCTCCGTTGCTGACTGTGGCAGGTGCCTAGACATCGCTGCCGAACAAATCCGCAACTGCTCCGCCGGGTCCTACGGTGGTCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTATGGCGAGACGACAGGGTCTTTGACTAAAGTATTGTATGGTGATCAGAATGCCAGAGAAGCCATTGCATTCACTGAAACTGCACAAAATTTGCTAATGAATCTCCAAACAGCAACACCCAGAATTTCAGGATTCTTTGCAGCCACAAAGATGCAAGTGCCTAATAATGGTGAAACTATTTATGCCTTTGCCCAGTGTGTTAATACTGTCACGCAAGGTGGTTGTCTAGATTTCGTAACGACTGGGTATAGCAATATGCAGATTTGCTTTACCTATTCAGAGGGTAGGGCTTTTGATGCTGGTTCTTTTATGAGATATTCAACCACTTCTTTCTTTGCTGATAATCAGACTATTGATATCACTCCCTTGGTCAAACCAGATTCATCAAGCAATAAGGCGACAATTATTGGCGGAGTTGTTGGAGGCGTAGCACTTGCTCTGATCCTCCTTGCATTATTTGCTTGGATTAGACGACCAAAAAGCCCCAAGAGAGTTCCTAGAGGAGATATAACTGAAACAAGTAAGTTGAAAGGCCCAGTTACTTATAGTTATCAGGATTTGAAGTCTGCAACCAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTATTGTATACAAGGAAAAAAAGAAAGGTTCTCTTGACTGGAAGCAACGATATGATATAATTTTAGGAACAGCACGTGGATTAGCTCATCTACATGAGGAATTTCACATTTGTATAATACATCGAGACATAAAGACCAACAATATCCTCCTAGATGATGACATGCAACTTAGAATTGCTGATTTGGACTGGGAAGATTTTTACCAGACAACAAATCTCATCTTAGCACAAATTTTGCAGGAACATTGCATGGAAACTATACGAGAGCAGCACGCACTTAGAGTTAGTGGACAGTACCTTAGACCCTAA 1332 0.4317 MMLRCPITLFILIFWSCWILNGVVSDPQTNLLKRGCSPPNQFVVSNYTIFNESLNSTLREIEQQIGDQNKHSATARRGNGGSPISTLFQCRNYLSVADCGRCLDIAAEQIRNCSAGSYGGHVVYDGCFLRYEAGDFYGETTGSLTKVLYGDQNAREAIAFTETAQNLLMNLQTATPRISGFFAATKMQVPNNGETIYAFAQCVNTVTQGGCLDFVTTGYSNMQICFTYSEGRAFDAGSFMRYSTTSFFADNQTIDITPLVKPDSSSNKATIIGGVVGGVALALILLALFAWIRRPKSPKRVPRGDITETSKLKGPVTYSYQDLKSATKNFSDENKLGEGGFGIVYKEKKKGSLDWKQRYDIILGTARGLAHLHEEFHICIIHRDIKTNNILLDDDMQLRIADLDWEDFYQTTNLILAQILQEHCMETIREQHALRVSGQYLRP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2208 443 SUPERFAMILY Protein kinase-like (PK-like) 309 411 IPR011009 -
Prci2g2208 443 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Prci2g2208 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Prci2g2208 443 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Prci2g2208 443 Pfam Protein kinase domain 349 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2208 443 FunFam Os07g0541700 protein 341 421 - -
Prci2g2208 443 Gene3D Phosphorylase Kinase; domain 1 303 356 - -
Prci2g2208 443 Pfam Salt stress response/antifungal 46 132 IPR002902 -
Prci2g2208 443 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Prci2g2208 443 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 350 402 - -
Prci2g2208 443 Gene3D - 29 136 IPR038408 -
Prci2g2208 443 Gene3D - 142 247 IPR038408 -
Prci2g2208 443 ProSiteProfiles Protein kinase domain profile. 228 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2208 443 Gene3D Transferase(Phosphotransferase) domain 1 357 433 - -
Prci2g2208 443 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2208 Prci-Chr2 17147034 17151572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2208 75 403 Receptor kinase-like Gene Family AT4G23280 26.913 2.52e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2208 Stress-antifung 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2208 - - pcin:129300003 400.208