Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2207 ATGATGCTTCGGTGTCCCATTACCTTATTTATCCTCATATTCTGGTCATGCTGGATTCTTAATGGCGTCGTTTCGGACCCTCAGACCAATCTTCTAAAGAGAGGGTGCAGCCCACCGAACCAGTTCGTGGTGTCCAACTACACGATCTTCAATGAAAGCCTAAACTCAACGCTGCGAGAAATCGAACAACAGATCGGTGATCAAAACAAGCACTCCGCCACCGCACGGCGAGGCAACGGAGGAAGCCCTATTTCCACTCTTTTCCAATGCAGAAACTATCTCTCCGTTGCTGACTGTGGCAGGTGCCTAGACATCGCTGCCGAACAAATCCGCAACTGCTCCGCCGGGTCCTACGGTGGTCATGTCGTCTACGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTATGGCGAGACGACAGGGTCTTTGACTAAAGTATTGTATGGTGATCAGAATGCCAGAGAAGCCATTGCATTCACTGAAACTGCACAAAATTTGCTAATGAATCTCCAAACAGCAACACCCAGAATTTCAGGATTCTTTGCAGCCACAAAGATGCAAGTGCCTAATAATGGTGAAACTATTTATGCCTTTGCCCAGTGTGTTAATACTGTCACGCAAGGTGGTTGTCTAGATTTCGTAACGACTGGGTATAGCAATATGCAGATTTGCTTTACCTATTCAGAGGGTAGGGCTTTTGATGCTGGTTCTTTTATGAGATATTCAACCACTTCTTTCTTTGCTGATAATCAGACTATTGATATCACTCCCTTGGTCAAACCAGATTCATCAAGCAATAAGGCGACAATTATTGGCGGAGTTGTTGGAGGCGTAGCACTTGCTCTGATCCTCCTTGCATTATTTGCTTGGATTAGACGACCAAAAAGCCCCAAGAGAGTTCCTAGAGGAGATATAACTGAAACAAGTAAGTTGAAAGGCCCAGTTACTTATAGTTATCAGGATTTGAAGTCTGCAACCAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGTATTGTATACAAGGAAAAAAAGAAAGGTTCTCTTGACTGGAAGCAACGATATGATATAATTTTAGGAACAGCACGTGGATTAGCTCATCTACATGAGGAATTTCACATTTGTATAATACATCGAGACATAAAGACCAACAATATCCTCCTAGATGATGACATGCAACTTAGAATTGCTGATTTGGACTGGGAAGATTTTTACCAGACAACAAATCTCATCTTAGCACAAATTTTGCAGGAACATTTATTGAAAATTATTAGTGGTAGAAAAAGTAAAGAATTGAAAGTTGATGGTGATGCTGAAGGTGAATTCCTCCTTCAAACGGCATGGAAACTATACGAGAGCAGCACGCACTTAGAGTTAGTGGACAGTACCTTAGACCCTAATGAGTATGATGTGGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTCCTGCGATAAGGCCAACAATGTCTGAAGTTATTGTTTTGCTGCAAAACAAGGGCTTATTAGAGAACGTAAGACCGACTATGCCTCTCTTGCTTGAAACTAATTAA 1581 0.4219 MMLRCPITLFILIFWSCWILNGVVSDPQTNLLKRGCSPPNQFVVSNYTIFNESLNSTLREIEQQIGDQNKHSATARRGNGGSPISTLFQCRNYLSVADCGRCLDIAAEQIRNCSAGSYGGHVVYDGCFLRYEAGDFYGETTGSLTKVLYGDQNAREAIAFTETAQNLLMNLQTATPRISGFFAATKMQVPNNGETIYAFAQCVNTVTQGGCLDFVTTGYSNMQICFTYSEGRAFDAGSFMRYSTTSFFADNQTIDITPLVKPDSSSNKATIIGGVVGGVALALILLALFAWIRRPKSPKRVPRGDITETSKLKGPVTYSYQDLKSATKNFSDENKLGEGGFGIVYKEKKKGSLDWKQRYDIILGTARGLAHLHEEFHICIIHRDIKTNNILLDDDMQLRIADLDWEDFYQTTNLILAQILQEHLLKIISGRKSKELKVDGDAEGEFLLQTAWKLYESSTHLELVDSTLDPNEYDVEEVKKIIEIGLLCTQASPAIRPTMSEVIVLLQNKGLLENVRPTMPLLLETN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2207 526 FunFam Os07g0541700 protein 341 420 - -
Prci2g2207 526 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Prci2g2207 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Prci2g2207 526 ProSiteProfiles Protein kinase domain profile. 228 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2207 526 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Prci2g2207 526 SUPERFAMILY Protein kinase-like (PK-like) 315 510 IPR011009 -
Prci2g2207 526 Gene3D Phosphorylase Kinase; domain 1 303 355 - -
Prci2g2207 526 Gene3D - 29 136 IPR038408 -
Prci2g2207 526 Gene3D - 142 247 IPR038408 -
Prci2g2207 526 Pfam Protein kinase domain 349 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2207 526 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Prci2g2207 526 Pfam Salt stress response/antifungal 46 132 IPR002902 -
Prci2g2207 526 Gene3D Transferase(Phosphotransferase) domain 1 424 514 - -
Prci2g2207 526 Gene3D Transferase(Phosphotransferase) domain 1 361 412 - -
Prci2g2207 526 Coils Coil 51 71 - -
Prci2g2207 526 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 424 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2207 Prci-Chr2 17146782 17151577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2207 59 517 Receptor kinase-like Gene Family AT4G23280 26.580 6.78e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2207 Stress-antifung 2.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2207 - - pcin:129300003 530.791