Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2204 ATGACTGTGTCGCCTGTTTTGACGCTGCCTCCAAACAAATCCGAGACTGCCCCGCCGGAGCACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGTGCAGAACAAAACTTGTGCATTGAACTTGGAATTAGAAATGATGAGTGGTATACTTTGTGTATTGAGGTACGAGACCAGTGCTTTCTTTGACCAGACAACTGAGAATTTCAATGCCGTGTCGTGTGGCAATCAAACTGCAAGAGAATCCACAGAATTTACCTCACTTGTGCAACAAGTTCTAATGAATCTGCAAACAACACCACCCAAAAGACGTGGGCTTTTTGCAGCCACAAAAGCACAATTGCCTGAGAATGGTTCAACTATTTATGCGTTTGCTCAATGTACTGAAACTATCACACAAAATGGGTGCCTCAATTGCTTGAACACTGGGTACAACAATATTCTCACTTGTTTTCCCAATTCTGATGGTAAGGCTTTTGCTGCTGGATGCTTCATGAGATACTCTTCCACTTCCTTCTTTCCTGATAATTTCCAGACAATTGATGTTACTCCCTTGTTAGGCAAACAAGGTACAAGCAATAAGGGGGCCATTGTCGGTGGTGTTGTTGGTGGTGTAATTCTTGTTTTGATCCTCATTGTATTATTTGCCTGTATTAGACGGCCAAAATGCACTACGAGGGTTCACAGAGGAGACATAATTAGAGCAACTAAGTTGAAAGGCCTTGTTACATATAGTTATAAGGATTTGAAGTTTGCAACTGATAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGTACTCTAAGGGATGGGAAAGAAGTTGCAGTCAAGAAGTTAACTTTACAACACTCTAGAAGAATTGAGGAAGATTTTGAGAGTGAAGTGATGCTCATAAGTGAAGTTGATCATCCAAATCTTGTTCAACTTCTGGGATGGTGTAGCCAAGGCCGTGTCAGGATCCTTGTTTATGAGTATATGAAGAACAATAGTCTTGACAAATTCTTATTTGATGGAAAGAAAGGTTATCTCAACTGGAAGCAGCGATATGATATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTTCACGAGGAATTTCATGTTCGTATTATACATAGAGACATAAAGACTAACAATATTCTCTTGGATAATGACCTACAACCTAGAATTGCTGATTTTGGATTGGCAAGGCTTTTACCAGAGGATAAATCTCACCTTAGCACAAAATTTGCAGGAACATTAGGATACACAGCACCGGAGTATGCAATTCATGGTCAATTATCAGAAAAAGTTGATGTCTATAGCTATGGTGTTGTAATTCTTGAAATCATTACTGGTCAACGAAGCAAAGCGATAAAGGATGAAGGCGATACCGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAGAAAGGCATGCACTTAGAGTTGGTGGACAAAACCTTAGACCCAAATGACTATGATGCAGAAGAAGTGAAGAAAATTATTGAGATTGCTTTGCTCTGTACCCAAGCGTTTGCTGACTTAAGGCCAACCATGTCCGAAGTAATTGGTTTGCTCCAAAATAGTGGCTTATTAGAAAATATAAGACCCTCTATGCCTCTCTTGATTGTAACTGATTAG 1653 0.4005 MTVSPVLTLPPNKSETAPPEHKVAAPSTTAASSVQNKTCALNLELEMMSGILCVLRYETSAFFDQTTENFNAVSCGNQTARESTEFTSLVQQVLMNLQTTPPKRRGLFAATKAQLPENGSTIYAFAQCTETITQNGCLNCLNTGYNNILTCFPNSDGKAFAAGCFMRYSSTSFFPDNFQTIDVTPLLGKQGTSNKGAIVGGVVGGVILVLILIVLFACIRRPKCTTRVHRGDIIRATKLKGLVTYSYKDLKFATDNFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLQHSRRIEEDFESEVMLISEVDHPNLVQLLGWCSQGRVRILVYEYMKNNSLDKFLFDGKKGYLNWKQRYDIILGIARGLTYLHEEFHVRIIHRDIKTNNILLDNDLQPRIADFGLARLLPEDKSHLSTKFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVILEIITGQRSKAIKDEGDTEDEFLLPKAWKLYEKGMHLELVDKTLDPNDYDAEEVKKIIEIALLCTQAFADLRPTMSEVIGLLQNSGLLENIRPSMPLLIVTD 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2204 550 SUPERFAMILY Protein kinase-like (PK-like) 239 530 IPR011009 -
Prci2g2204 550 FunFam Cysteine-rich receptor-like protein kinase 2 224 333 - -
Prci2g2204 550 FunFam Cysteine-rich receptor-like protein kinase 2 70 173 - -
Prci2g2204 550 CDD STKc_IRAK 263 532 - -
Prci2g2204 550 Gene3D Phosphorylase Kinase; domain 1 231 333 - -
Prci2g2204 550 ProSitePatterns Protein kinases ATP-binding region signature. 263 286 IPR017441 GO:0005524
Prci2g2204 550 ProSiteProfiles Protein kinase domain profile. 257 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2204 550 Pfam Salt stress response/antifungal 75 170 IPR002902 -
Prci2g2204 550 MobiDBLite consensus disorder prediction 1 29 - -
Prci2g2204 550 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 48 538 - -
Prci2g2204 550 Gene3D Transferase(Phosphotransferase) domain 1 334 538 - -
Prci2g2204 550 Pfam Protein kinase domain 258 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2204 550 SMART serkin_6 257 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2204 550 ProSiteProfiles Gnk2-homologous domain profile. 68 173 IPR002902 -
Prci2g2204 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Prci2g2204 550 Gene3D - 67 173 IPR038408 -
Prci2g2204 550 FunFam Cysteine-rich receptor-like protein kinase 2 334 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2204 Prci-Chr2 17052201 17056138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2204 53 532 Receptor kinase-like Gene Family AT1G70520 40.000 1.36e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2204 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2204 - - pcin:129300003 717.613