Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g2204 | ATGACTGTGTCGCCTGTTTTGACGCTGCCTCCAAACAAATCCGAGACTGCCCCGCCGGAGCACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGTGCAGAACAAAACTTGTGCATTGAACTTGGAATTAGAAATGATGAGTGGTATACTTTGTGTATTGAGGTACGAGACCAGTGCTTTCTTTGACCAGACAACTGAGAATTTCAATGCCGTGTCGTGTGGCAATCAAACTGCAAGAGAATCCACAGAATTTACCTCACTTGTGCAACAAGTTCTAATGAATCTGCAAACAACACCACCCAAAAGACGTGGGCTTTTTGCAGCCACAAAAGCACAATTGCCTGAGAATGGTTCAACTATTTATGCGTTTGCTCAATGTACTGAAACTATCACACAAAATGGGTGCCTCAATTGCTTGAACACTGGGTACAACAATATTCTCACTTGTTTTCCCAATTCTGATGGTAAGGCTTTTGCTGCTGGATGCTTCATGAGATACTCTTCCACTTCCTTCTTTCCTGATAATTTCCAGACAATTGATGTTACTCCCTTGTTAGGCAAACAAGGTACAAGCAATAAGGGGGCCATTGTCGGTGGTGTTGTTGGTGGTGTAATTCTTGTTTTGATCCTCATTGTATTATTTGCCTGTATTAGACGGCCAAAATGCACTACGAGGGTTCACAGAGGAGACATAATTAGAGCAACTAAGTTGAAAGGCCTTGTTACATATAGTTATAAGGATTTGAAGTTTGCAACTGATAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGTACTCTAAGGGATGGGAAAGAAGTTGCAGTCAAGAAGTTAACTTTACAACACTCTAGAAGAATTGAGGAAGATTTTGAGAGTGAAGTGATGCTCATAAGTGAAGTTGATCATCCAAATCTTGTTCAACTTCTGGGATGGTGTAGCCAAGGCCGTGTCAGGATCCTTGTTTATGAGTATATGAAGAACAATAGTCTTGACAAATTCTTATTTGATGGAAAGAAAGGTTATCTCAACTGGAAGCAGCGATATGATATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTTCACGAGGAATTTCATGTTCGTATTATACATAGAGACATAAAGACTAACAATATTCTCTTGGATAATGACCTACAACCTAGAATTGCTGATTTTGGATTGGCAAGGCTTTTACCAGAGGATAAATCTCACCTTAGCACAAAATTTGCAGGAACATTAGGATACACAGCACCGGAGTATGCAATTCATGGTCAATTATCAGAAAAAGTTGATGTCTATAGCTATGGTGTTGTAATTCTTGAAATCATTACTGGTCAACGAAGCAAAGCGATAAAGGATGAAGGCGATACCGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAGAAAGGCATGCACTTAGAGTTGGTGGACAAAACCTTAGACCCAAATGACTATGATGCAGAAGAAGTGAAGAAAATTATTGAGATTGCTTTGCTCTGTACCCAAGCGTTTGCTGACTTAAGGCCAACCATGTCCGAAGTAATTGGTTTGCTCCAAAATAGTGGCTTATTAGAAAATATAAGACCCTCTATGCCTCTCTTGATTGTAACTGATTAG | 1653 | 0.4005 | MTVSPVLTLPPNKSETAPPEHKVAAPSTTAASSVQNKTCALNLELEMMSGILCVLRYETSAFFDQTTENFNAVSCGNQTARESTEFTSLVQQVLMNLQTTPPKRRGLFAATKAQLPENGSTIYAFAQCTETITQNGCLNCLNTGYNNILTCFPNSDGKAFAAGCFMRYSSTSFFPDNFQTIDVTPLLGKQGTSNKGAIVGGVVGGVILVLILIVLFACIRRPKCTTRVHRGDIIRATKLKGLVTYSYKDLKFATDNFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLQHSRRIEEDFESEVMLISEVDHPNLVQLLGWCSQGRVRILVYEYMKNNSLDKFLFDGKKGYLNWKQRYDIILGIARGLTYLHEEFHVRIIHRDIKTNNILLDNDLQPRIADFGLARLLPEDKSHLSTKFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVILEIITGQRSKAIKDEGDTEDEFLLPKAWKLYEKGMHLELVDKTLDPNDYDAEEVKKIIEIALLCTQAFADLRPTMSEVIGLLQNSGLLENIRPSMPLLIVTD | 550 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g2204 | 550 | SUPERFAMILY | Protein kinase-like (PK-like) | 239 | 530 | IPR011009 | - | |
Prci2g2204 | 550 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 224 | 333 | - | - | |
Prci2g2204 | 550 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 70 | 173 | - | - | |
Prci2g2204 | 550 | CDD | STKc_IRAK | 263 | 532 | - | - | |
Prci2g2204 | 550 | Gene3D | Phosphorylase Kinase; domain 1 | 231 | 333 | - | - | |
Prci2g2204 | 550 | ProSitePatterns | Protein kinases ATP-binding region signature. | 263 | 286 | IPR017441 | GO:0005524 | |
Prci2g2204 | 550 | ProSiteProfiles | Protein kinase domain profile. | 257 | 546 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2204 | 550 | Pfam | Salt stress response/antifungal | 75 | 170 | IPR002902 | - | |
Prci2g2204 | 550 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Prci2g2204 | 550 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 48 | 538 | - | - | |
Prci2g2204 | 550 | Gene3D | Transferase(Phosphotransferase) domain 1 | 334 | 538 | - | - | |
Prci2g2204 | 550 | Pfam | Protein kinase domain | 258 | 463 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2204 | 550 | SMART | serkin_6 | 257 | 536 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2204 | 550 | ProSiteProfiles | Gnk2-homologous domain profile. | 68 | 173 | IPR002902 | - | |
Prci2g2204 | 550 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 378 | 390 | IPR008271 | GO:0004672|GO:0006468 | |
Prci2g2204 | 550 | Gene3D | - | 67 | 173 | IPR038408 | - | |
Prci2g2204 | 550 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 334 | 538 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g2204 | Prci-Chr2 | 17052201 | 17056138 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g2204 | 53 | 532 | Receptor kinase-like Gene Family | AT1G70520 | 40.000 | 1.36e-111 | 344 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Prci2g2204 | Pkinase | 1.1e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g2204 | - | - | pcin:129300003 | 717.613 |