Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2203 ATGCTTCAACCTAATTTCCTTCCATTAATCACCTTTGTATTCTGGTCATGGTGGAGGCTTAACGGCGTCGTTGCCGACCCCCAGATCAATCTCCTAAGCCAAGGGTGTACACCATCCACCATCTTCGTCTTGTCCAACTTCTCCATCTTCAGCGACAACGTCAACAAAACGTTTCGACACATGAGAAAGAAGCTCGTCAATAGTCAAAACGAGAACTTCGTGACAGCGCAGCAAGCCAACGCTGAAAACCCAGTTTTCAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTCGCCTGTTTTGACGCTGCCTCCAAACAAATCCGAGACTGCCCCGCCGGAGCACAAGGTGGCCGCGCCGTCTACGACGGCTGCTTCCTCAGGTACGAGACCAGTGCTTTCTTTGACCAGACAACTGAGAATTTCAATGCCGTGTCGTGTGGCAATCAAACTGCAAGAGAATCCACAGAATTTACCTCACTTGTGCAACAAGTTCTAATGAATCTGCAAACAACACCACCCAAAAGACGTGGGCTTTTTGCAGCCACAAAAGCACAATTGCCTGAGAATGGTTCAACTATTTATGCGTTTGCTCAATGTACTGAAACTATCACACAAAATGGGTGCCTCAATTGCTTGAACACTGGGTACAACAATATTCTCACTTGTTTTCCCAATTCTGATGGTAAGGCTTTTGCTGCTGGATGCTTCATGAGATACTCTTCCACTTCCTTCTTTCCTGATAATTTCCAGACAATTGATGTTACTCCCTTGTTAGGCAAACAAGGTACAAGCAATAAGGGGGCCATTGTCGGTGGTGTTGTTGGTGGTGTAATTCTTGTTTTGATCCTCATTGTATTATTTGCCTGTATTAGACGGCCAAAATGCACTACGAGGGTTCACAGAGGAGACATAATTAGAGCAACTAAGTTGAAAGGCCTTGTTACATATAGTTATAAGGATTTGAAGTTTGCAACTGATAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGCAGTATATAAGGGTACTCTAAGGGATGGGAAAGAAGTTGCAGTCAAGAAGTTAACTTTACAACACTCTAGAAGAATTGAGGAAGATTTTGAGAGTGAAGTGATGCTCATAAGTGAAGTTGATCATCCAAATCTTGTTCAACTTCTGGGATGGTGTAGCCAAGGCCGTGTCAGGATCCTTGTTTATGAGTATATGAAGAACAATAGTCTTGACAAATTCTTATTTGATGGAAAGAAAGGTTATCTCAACTGGAAGCAGCGATATGATATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTTCACGAGGAATTTCATGTTCGTATTATACATAGAGACATAAAGACTAACAATATTCTCTTGGATAATGACCTACAACCTAGAATTGCTGATTTTGGATTGGCAAGGCTTTTACCAGAGGATAAATCTCACCTTAGCACAAAATTTGCAGGAACATTAGGATACACAGCACCGGAGTATGCAATTCATGGTCAATTATCAGAAAAAGTTGATGTCTATAGCTATGGTGTTGTAATTCTTGAAATCATTACTGGTCAACGAAGCAAAGCGATAAAGGATGAAGGCGATACCGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAGAAAGGCATGCACTTAGAGTTGGTGGACAAAACCTTAGACCCAAATGACTATGATGCAGAAGAAGTGAAGAAAATTATTGAGATTGCTTTGCTCTGTACCCAAGCGTTTGCTGACTTAAGGCCAACCATGTCCGAAGTAATTGGTTTGCTCCAAAATAGTGGCTTATTAGAAAATATAAGACCCTCTATGCCTCTCTTGATTGTAACTGATTAG 1878 0.4132 MLQPNFLPLITFVFWSWWRLNGVVADPQINLLSQGCTPSTIFVLSNFSIFSDNVNKTFRHMRKKLVNSQNENFVTAQQANAENPVFSLFQCRNYLSVHDCVACFDAASKQIRDCPAGAQGGRAVYDGCFLRYETSAFFDQTTENFNAVSCGNQTARESTEFTSLVQQVLMNLQTTPPKRRGLFAATKAQLPENGSTIYAFAQCTETITQNGCLNCLNTGYNNILTCFPNSDGKAFAAGCFMRYSSTSFFPDNFQTIDVTPLLGKQGTSNKGAIVGGVVGGVILVLILIVLFACIRRPKCTTRVHRGDIIRATKLKGLVTYSYKDLKFATDNFSEENKLGEGGFGAVYKGTLRDGKEVAVKKLTLQHSRRIEEDFESEVMLISEVDHPNLVQLLGWCSQGRVRILVYEYMKNNSLDKFLFDGKKGYLNWKQRYDIILGIARGLTYLHEEFHVRIIHRDIKTNNILLDNDLQPRIADFGLARLLPEDKSHLSTKFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVILEIITGQRSKAIKDEGDTEDEFLLPKAWKLYEKGMHLELVDKTLDPNDYDAEEVKKIIEIALLCTQAFADLRPTMSEVIGLLQNSGLLENIRPSMPLLIVTD 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2203 625 FunFam Cysteine-rich receptor-like protein kinase 2 299 408 - -
Prci2g2203 625 Pfam Protein kinase domain 333 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2203 625 Gene3D Phosphorylase Kinase; domain 1 306 408 - -
Prci2g2203 625 FunFam Cysteine-rich receptor-like protein kinase 2 409 613 - -
Prci2g2203 625 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Prci2g2203 625 Gene3D - 30 137 IPR038408 -
Prci2g2203 625 Gene3D - 142 248 IPR038408 -
Prci2g2203 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Prci2g2203 625 ProSiteProfiles Protein kinase domain profile. 332 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2203 625 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 613 - -
Prci2g2203 625 SMART serkin_6 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2203 625 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Prci2g2203 625 Gene3D Transferase(Phosphotransferase) domain 1 409 613 - -
Prci2g2203 625 Pfam Salt stress response/antifungal 46 134 IPR002902 -
Prci2g2203 625 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Prci2g2203 625 CDD STKc_IRAK 338 607 - -
Prci2g2203 625 ProSiteProfiles Gnk2-homologous domain profile. 29 137 IPR002902 -
Prci2g2203 625 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Prci2g2203 625 SUPERFAMILY Protein kinase-like (PK-like) 314 605 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2203 Prci-Chr2 17052201 17056484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2203 4 607 Receptor kinase-like Gene Family AT1G70520 37.398 1.48e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2203 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2203 - - pcin:129300003 932.169