Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2202 ATGCTTCAACGTCTGAATCTCCTTCCCTTATTGGCCTTCATATTCTGCTCATGCTGGACCCTCCACGTCGTCGTTTCGGATCCGCAGACCAATCTTGTGAGCAGATTCTGCAACCCATACGACGTATTGAAGGTGTCCAACACCTCCATGTTCGATGAAAACCGAAACGCAACGTTTCAAGACATCAGAAAGCTGATTAGTGACCAAAGCAAGCACTTCGCCACTGCTCAACAAGCCAATGGTGGGAACCCTGTCGCCACTCTTTTTCAATGTAGAAACTACCTCTCCATCGCCGACTGTGTCGTGTGCTTCGACGTCGCCGCCATGAAAATTCTGAGCAGTTGCACCGGTGGGTCCCCCGGTGGTTTTGTCGTCTACGACGGTTGCTACCTTAGGTATGATGCCAGCAGCGCCTTCTTTGGCGAGACAACGCCTTCTATCAACAGCGTAAAATGTGGAAATCAAACTGATGATGGAGAAGCCATTAATGCATTTGACTCAACTGTTGAACAAGTTCTAACGAATCTCAAAACTACAACACCCACAACTACTGGTTTCTTTGCAGCCATGAAGATGCAAGTGCCTAATAATAATATTGGTCAAACGGTTTATGCTTTTGCTCAATGTATTGAAACTATCTCAGAGAACGTGTGCCTCAGTTGCTTGAATGCTACGTACAGCAATTTGCACACTTGTCTTCCAAATTCCAATGGTAGGGCATATACTAATGCCTGTTTCATGAGATACTCCACCAGTTCCTTCTTTCCTGATAACCAGACCACTCACATCGCACCCTTGTCGGAACAAGGTTCAAATGAGAAGAGGACCATTATTATAGGTGTAGTTGTTGGAGGTTTAGCTTTTGTTTTGATCCTCCTTACACTATTAGCTTGGATTAAGCGGCCAAAAAGGCCTGAGAGAGCAGTTCCTAGGGGAGACATATCTGGAGTAAGTAAGTTGAAAGGCCCAGTTATTTTTAGTTATAAGGAGTTGAAGTTTGCTACTAAAAGTTTCAGTGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTACTGTATATAAGGGTACTTTGAAGAATGGGAAAGTGGTTGCTGTCAAGAAATTAATTTTACGCCAGTCTAATAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTAATAAGCAATGTTCATCATCGGAATCTTATTCGCCTTCTTGGATGTTGCAGTAAAGGCAACGAGAGAATTCTGATTTATGAATATATGAGAAATAGCAGTCTTGACAGATTCTTATTTGGTAGAAATAGAGGTTCTCTCAATTGGAGACAACGATGTGATATAATTTTAGGAACTGCAAGGGGGTTGGCTTATTTACATGAAGAATTTCATGTTCGAATCATACACAGAGACATAAAGACTAACAACATTCTCTTAGATGATGATCTCCAACCGAGAATTGCTGATTTTGGCTTAACGAGGCTATTACCTGATGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGGTACACAGCTCCAGAATATGCAATTCATGGTCAATTATCAGAAAAAGCTGATATTTATAGCTATGGAGTTGTAGTTCTGGAAATGATCAGTGGTGAACAAAGCAATGAAATCATGACCCATGGTGATTTTGAAGGCGACTTCCTCCTTCGGAAAGCTTGGAAACTGTACGAGAGAGGCATGCACATAGAGTTGGTAGACGAAACCTTGGACCCTAATGAATATGATGTAGAAGAAGTGGAGAAAATGGTAGAGATTGGTTTGCTTTGCACTCAAGCATCTGCTGAATTAAGGCCAACAATGTCTGAAGTAATTGTTTTGCTCCAAGATAAAAGCTTATTAGAGAATATGAGACCCACTATGCCTATCTTGATTGAAACTTGA 1896 0.4135 MLQRLNLLPLLAFIFCSCWTLHVVVSDPQTNLVSRFCNPYDVLKVSNTSMFDENRNATFQDIRKLISDQSKHFATAQQANGGNPVATLFQCRNYLSIADCVVCFDVAAMKILSSCTGGSPGGFVVYDGCYLRYDASSAFFGETTPSINSVKCGNQTDDGEAINAFDSTVEQVLTNLKTTTPTTTGFFAAMKMQVPNNNIGQTVYAFAQCIETISENVCLSCLNATYSNLHTCLPNSNGRAYTNACFMRYSTSSFFPDNQTTHIAPLSEQGSNEKRTIIIGVVVGGLAFVLILLTLLAWIKRPKRPERAVPRGDISGVSKLKGPVIFSYKELKFATKSFSAENKLGEGGFGTVYKGTLKNGKVVAVKKLILRQSNKKVEEEFESEVKLISNVHHRNLIRLLGCCSKGNERILIYEYMRNSSLDRFLFGRNRGSLNWRQRCDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLTRLLPDEKSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEMISGEQSNEIMTHGDFEGDFLLRKAWKLYERGMHIELVDETLDPNEYDVEEVEKMVEIGLLCTQASAELRPTMSEVIVLLQDKSLLENMRPTMPILIET 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2202 631 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Prci2g2202 631 SUPERFAMILY Protein kinase-like (PK-like) 319 612 IPR011009 -
Prci2g2202 631 FunFam Cysteine-rich receptor-like protein kinase 2 416 620 - -
Prci2g2202 631 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Prci2g2202 631 Pfam Salt stress response/antifungal 152 251 IPR002902 -
Prci2g2202 631 CDD STKc_IRAK 344 613 - -
Prci2g2202 631 Pfam Protein kinase domain 339 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2202 631 FunFam Cysteine-rich receptor-like protein kinase 2 147 254 - -
Prci2g2202 631 ProSiteProfiles Protein kinase domain profile. 338 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2202 631 ProSiteProfiles Gnk2-homologous domain profile. 147 254 IPR002902 -
Prci2g2202 631 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 629 - -
Prci2g2202 631 FunFam Cysteine-rich receptor-like protein kinase 2 306 415 - -
Prci2g2202 631 Gene3D Phosphorylase Kinase; domain 1 314 415 - -
Prci2g2202 631 Gene3D Transferase(Phosphotransferase) domain 1 416 622 - -
Prci2g2202 631 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Prci2g2202 631 Gene3D - 147 254 IPR038408 -
Prci2g2202 631 Gene3D - 29 137 IPR038408 -
Prci2g2202 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Prci2g2202 631 CDD TM_EGFR-like 271 304 - -
Prci2g2202 631 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Prci2g2202 631 SMART serkin_6 338 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2202 Prci-Chr2 17042557 17048501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2202 5 630 Receptor kinase-like Gene Family AT1G70520 38.088 1.40e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2202 Pkinase 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2202 - - gmx:100813585 754.977