Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2201 ATGCTTCAACGTCTGAATCTCCTTCCCTTATTGGCCTTCATATTCTGCTCATGCTGGACCCTCCACGTCGTCGTTTCGGATCCGCAGACCAATCTTGTGAGCAGATTCTGCAACCCATACGACGTATTGAAGGTGTCCAACACCTCCATGTTCGATGAAAACCGAAACGCAACGTTTCAAGACATCAGAAAGCTGATTAGTGACCAAAGCAAGCACTTCGCCACTGCTCAACAAGCCAATGGTGGGAACCCTGTCGCCACTCTTTTTCAATGTAGAAACTACCTCTCCATCGCCGACTGTGTCGTGTGCTTCGACGTCGCCGCCATGAAAATTCTGAGCAGTTGCACCGGTGGGTCCCCCGGTGGTTTTGTCGTCTACGACGGTTGCTACCTTAGGTATGATGCCAGCAGCGCCTTCTTTGGCGAGACAACGCCTTCTATCAACAGCGTAAAATGTGGAAATCAAACTGATGATGGAGAAGCCATTAATGCATTTGACTCAACTGTTGAACAAGTTCTAACGAATCTCAAAACTACAACACCCACAACTACTGGTTTCTTTGCAGCCATGAAGATGCAAGTGCCTAATAATAATATTGGTCAAACGGTTTATGCTTTTGCTCAATGTATTGAAACTATCTCAGAGAACGTGTGCCTCAGTTGCTTGAATGCTACGTACAGCAATTTGCACACTTGTCTTCCAAATTCCAATGGTAGGGCATATACTAATGCCTGTTTCATGAGATACTCCACCAGTTCCTTCTTTCCTGATAACCAGACCACTCACATCGCACCCTTGTCGGAACAAGGAGACATATCTGGAGTAAGTAAGTTGAAAGGCCCAGTTATTTTTAGTTATAAGGAGTTGAAGTTTGCTACTAAAAGTTTCAGTGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTACTGTATATAAGGGTACTTTGAAGAATGGGAAAGTGGTTGCTGTCAAGAAATTAATTTTACGCCAGTCTAATAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTAATAAGCAATGTTCATCATCGGAATCTTATTCGCCTTCTTGGATGTTGCAGTAAAGGCAACGAGAGAATTCTGATTTATGAATATATGAGAAATAGCAGTCTTGACAGATTCTTATTTGGTAGAAATAGAGGTTCTCTCAATTGGAGACAACGATGTGATATAATTTTAGGAACTGCAAGGGGGTTGGCTTATTTACATGAAGAATTTCATGTTCGAATCATACACAGAGACATAAAGACTAACAACATTCTCTTAGATGATGATCTCCAACCGAGAATTGCTGATTTTGGCTTAACGAGGCTATTACCTGATGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGGTACACAGCTCCAGAATATGCAATTCATGGTCAATTATCAGAAAAAGCTGATATTTATAGCTATGGAGTTGTAGTTCTGGAAATGATCAGTGGTGAACAAAGCAATGAAATCATGACCCATGGTGATTTTGAAGGCGACTTCCTCCTTCGGAAAGCTTGGAAACTGTACGAGAGAGGCATGCACATAGAGTTGGTAGACGAAACCTTGGACCCTAATGAATATGATGTAGAAGAAGTGGAGAAAATGGTAGAGATTGGTTTGCTTTGCACTCAAGCATCTGCTGAATTAAGGCCAACAATGTCTGAAGTAATTGTTTTGCTCCAAGATAAAAGCTTATTAGAGAATATGAGACCCACTATGCCTATCTTGATTGAAACTTGA 1770 0.413 MLQRLNLLPLLAFIFCSCWTLHVVVSDPQTNLVSRFCNPYDVLKVSNTSMFDENRNATFQDIRKLISDQSKHFATAQQANGGNPVATLFQCRNYLSIADCVVCFDVAAMKILSSCTGGSPGGFVVYDGCYLRYDASSAFFGETTPSINSVKCGNQTDDGEAINAFDSTVEQVLTNLKTTTPTTTGFFAAMKMQVPNNNIGQTVYAFAQCIETISENVCLSCLNATYSNLHTCLPNSNGRAYTNACFMRYSTSSFFPDNQTTHIAPLSEQGDISGVSKLKGPVIFSYKELKFATKSFSAENKLGEGGFGTVYKGTLKNGKVVAVKKLILRQSNKKVEEEFESEVKLISNVHHRNLIRLLGCCSKGNERILIYEYMRNSSLDRFLFGRNRGSLNWRQRCDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLTRLLPDEKSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEMISGEQSNEIMTHGDFEGDFLLRKAWKLYERGMHIELVDETLDPNEYDVEEVEKMVEIGLLCTQASAELRPTMSEVIVLLQDKSLLENMRPTMPILIET 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2201 589 CDD STKc_IRAK 302 571 - -
Prci2g2201 589 Pfam Protein kinase domain 297 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2201 589 ProSitePatterns Protein kinases ATP-binding region signature. 302 325 IPR017441 GO:0005524
Prci2g2201 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Prci2g2201 589 SMART serkin_6 296 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2201 589 Gene3D Phosphorylase Kinase; domain 1 269 373 - -
Prci2g2201 589 ProSiteProfiles Protein kinase domain profile. 296 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2201 589 FunFam Cysteine-rich receptor-like protein kinase 2 147 254 - -
Prci2g2201 589 ProSiteProfiles Gnk2-homologous domain profile. 147 254 IPR002902 -
Prci2g2201 589 Gene3D Transferase(Phosphotransferase) domain 1 374 580 - -
Prci2g2201 589 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Prci2g2201 589 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 587 - -
Prci2g2201 589 FunFam Cysteine-rich receptor-like protein kinase 2 374 578 - -
Prci2g2201 589 FunFam Cysteine-rich receptor-like protein kinase 2 267 373 - -
Prci2g2201 589 SUPERFAMILY Protein kinase-like (PK-like) 277 570 IPR011009 -
Prci2g2201 589 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Prci2g2201 589 Gene3D - 29 137 IPR038408 -
Prci2g2201 589 Gene3D - 147 254 IPR038408 -
Prci2g2201 589 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Prci2g2201 589 Pfam Salt stress response/antifungal 152 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2201 Prci-Chr2 17042557 17048501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2201 8 588 Receptor kinase-like Gene Family AT1G70520 38.118 2.70e-121 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2201 Pkinase 5.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2201 - - gmx:100813585 711.835