Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g2201 | ATGCTTCAACGTCTGAATCTCCTTCCCTTATTGGCCTTCATATTCTGCTCATGCTGGACCCTCCACGTCGTCGTTTCGGATCCGCAGACCAATCTTGTGAGCAGATTCTGCAACCCATACGACGTATTGAAGGTGTCCAACACCTCCATGTTCGATGAAAACCGAAACGCAACGTTTCAAGACATCAGAAAGCTGATTAGTGACCAAAGCAAGCACTTCGCCACTGCTCAACAAGCCAATGGTGGGAACCCTGTCGCCACTCTTTTTCAATGTAGAAACTACCTCTCCATCGCCGACTGTGTCGTGTGCTTCGACGTCGCCGCCATGAAAATTCTGAGCAGTTGCACCGGTGGGTCCCCCGGTGGTTTTGTCGTCTACGACGGTTGCTACCTTAGGTATGATGCCAGCAGCGCCTTCTTTGGCGAGACAACGCCTTCTATCAACAGCGTAAAATGTGGAAATCAAACTGATGATGGAGAAGCCATTAATGCATTTGACTCAACTGTTGAACAAGTTCTAACGAATCTCAAAACTACAACACCCACAACTACTGGTTTCTTTGCAGCCATGAAGATGCAAGTGCCTAATAATAATATTGGTCAAACGGTTTATGCTTTTGCTCAATGTATTGAAACTATCTCAGAGAACGTGTGCCTCAGTTGCTTGAATGCTACGTACAGCAATTTGCACACTTGTCTTCCAAATTCCAATGGTAGGGCATATACTAATGCCTGTTTCATGAGATACTCCACCAGTTCCTTCTTTCCTGATAACCAGACCACTCACATCGCACCCTTGTCGGAACAAGGAGACATATCTGGAGTAAGTAAGTTGAAAGGCCCAGTTATTTTTAGTTATAAGGAGTTGAAGTTTGCTACTAAAAGTTTCAGTGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTACTGTATATAAGGGTACTTTGAAGAATGGGAAAGTGGTTGCTGTCAAGAAATTAATTTTACGCCAGTCTAATAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTAATAAGCAATGTTCATCATCGGAATCTTATTCGCCTTCTTGGATGTTGCAGTAAAGGCAACGAGAGAATTCTGATTTATGAATATATGAGAAATAGCAGTCTTGACAGATTCTTATTTGGTAGAAATAGAGGTTCTCTCAATTGGAGACAACGATGTGATATAATTTTAGGAACTGCAAGGGGGTTGGCTTATTTACATGAAGAATTTCATGTTCGAATCATACACAGAGACATAAAGACTAACAACATTCTCTTAGATGATGATCTCCAACCGAGAATTGCTGATTTTGGCTTAACGAGGCTATTACCTGATGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGGTACACAGCTCCAGAATATGCAATTCATGGTCAATTATCAGAAAAAGCTGATATTTATAGCTATGGAGTTGTAGTTCTGGAAATGATCAGTGGTGAACAAAGCAATGAAATCATGACCCATGGTGATTTTGAAGGCGACTTCCTCCTTCGGAAAGCTTGGAAACTGTACGAGAGAGGCATGCACATAGAGTTGGTAGACGAAACCTTGGACCCTAATGAATATGATGTAGAAGAAGTGGAGAAAATGGTAGAGATTGGTTTGCTTTGCACTCAAGCATCTGCTGAATTAAGGCCAACAATGTCTGAAGTAATTGTTTTGCTCCAAGATAAAAGCTTATTAGAGAATATGAGACCCACTATGCCTATCTTGATTGAAACTTGA | 1770 | 0.413 | MLQRLNLLPLLAFIFCSCWTLHVVVSDPQTNLVSRFCNPYDVLKVSNTSMFDENRNATFQDIRKLISDQSKHFATAQQANGGNPVATLFQCRNYLSIADCVVCFDVAAMKILSSCTGGSPGGFVVYDGCYLRYDASSAFFGETTPSINSVKCGNQTDDGEAINAFDSTVEQVLTNLKTTTPTTTGFFAAMKMQVPNNNIGQTVYAFAQCIETISENVCLSCLNATYSNLHTCLPNSNGRAYTNACFMRYSTSSFFPDNQTTHIAPLSEQGDISGVSKLKGPVIFSYKELKFATKSFSAENKLGEGGFGTVYKGTLKNGKVVAVKKLILRQSNKKVEEEFESEVKLISNVHHRNLIRLLGCCSKGNERILIYEYMRNSSLDRFLFGRNRGSLNWRQRCDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLTRLLPDEKSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEMISGEQSNEIMTHGDFEGDFLLRKAWKLYERGMHIELVDETLDPNEYDVEEVEKMVEIGLLCTQASAELRPTMSEVIVLLQDKSLLENMRPTMPILIET | 589 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g2201 | 589 | CDD | STKc_IRAK | 302 | 571 | - | - | |
Prci2g2201 | 589 | Pfam | Protein kinase domain | 297 | 498 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2201 | 589 | ProSitePatterns | Protein kinases ATP-binding region signature. | 302 | 325 | IPR017441 | GO:0005524 | |
Prci2g2201 | 589 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 418 | 430 | IPR008271 | GO:0004672|GO:0006468 | |
Prci2g2201 | 589 | SMART | serkin_6 | 296 | 575 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2201 | 589 | Gene3D | Phosphorylase Kinase; domain 1 | 269 | 373 | - | - | |
Prci2g2201 | 589 | ProSiteProfiles | Protein kinase domain profile. | 296 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g2201 | 589 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 147 | 254 | - | - | |
Prci2g2201 | 589 | ProSiteProfiles | Gnk2-homologous domain profile. | 147 | 254 | IPR002902 | - | |
Prci2g2201 | 589 | Gene3D | Transferase(Phosphotransferase) domain 1 | 374 | 580 | - | - | |
Prci2g2201 | 589 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Prci2g2201 | 589 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 88 | 587 | - | - | |
Prci2g2201 | 589 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 374 | 578 | - | - | |
Prci2g2201 | 589 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 267 | 373 | - | - | |
Prci2g2201 | 589 | SUPERFAMILY | Protein kinase-like (PK-like) | 277 | 570 | IPR011009 | - | |
Prci2g2201 | 589 | ProSiteProfiles | Gnk2-homologous domain profile. | 33 | 138 | IPR002902 | - | |
Prci2g2201 | 589 | Gene3D | - | 29 | 137 | IPR038408 | - | |
Prci2g2201 | 589 | Gene3D | - | 147 | 254 | IPR038408 | - | |
Prci2g2201 | 589 | Pfam | Salt stress response/antifungal | 45 | 134 | IPR002902 | - | |
Prci2g2201 | 589 | Pfam | Salt stress response/antifungal | 152 | 251 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g2201 | Prci-Chr2 | 17042557 | 17048501 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g2201 | 8 | 588 | Receptor kinase-like Gene Family | AT1G70520 | 38.118 | 2.70e-121 | 371 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Prci2g2201 | Pkinase | 5.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g2201 | - | - | gmx:100813585 | 711.835 |