Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2200 ATGCATCGCATCCAAACATGTGAATTGACAAATCTGTCCCTGCCCAAGTGCCCAGGGCCTCTTTCCTTCTCCACATTCTTCATTCTCTCCACGCATGGCCTTCCGTCTCGGACATTAAACTCTCAGACCAAACTCCGGAAAAAAAAAAAAAAAAAGCTTCAACCTCATCTTCTTCCATTAATTACATTGTTATTCTGCTCATGCTGGATTCTTGACGGTGTCGTTTCGGAGCCCCAGACCCATTTTTTGAACCGAGGTTGCAACCCGTACGCCGAATTCCTCGTGTCCAACGTCACCCTCTTCGGTGAAAACATAAAAGCATCGTTGCGAGACATCAGAGAGCAGATCGGTGACCAAAACACGCACTTCGCGACTGCGCAGCAAGCCGGCGCCAGTGGTGGAAACACCGTCTCCACTCTTTTCCAATGCAGAAGCTACCTCTCCATCGCCGACTGTGTCGCCTGCTTCGACGTCGCTGCCCCTCAAATTTTCAGCTGCGCCGCCGGGGACCTCGGTGGCCATGTCGTCTACGACGGGTGCTACCTCAGGTACGACATTAGTAGCGCTTTCTTTGGCGACACGACCCAGTCCGTGAATAGTGCATCATGTGGGAGTCAAACTACTGAAGAACCAGCTACTGTATTCACCTCAGCTGTGCATCAAGTGCTCATGAATCTGCAAACAGCAACACCCAGAATCACTGCCTTCTCTGCAGCCACAAAGACGCAAGTGTCTGATAATGGTGCAACCATTTATGCATTTGCTCAATGTATTCAAACTATCACATCAAGTAAGTGCGAGGATTGCTTGAATGCTCAGTACAACAATATGCAGACTTGTCTTCCCAATTCAGATGGTAGGGCTTATGCTAATGGCTGTTTCTTGAGATATTCCACCACTTCTTTCTTTCCTGATAACCAGACCATTGATATCACTACTCCTTTCTTCCAACAAGGTTCAAGCAATAAGGGAGCCATTATAGGTGGGCTTGTTGGAAGCGTGGTAGCTCTTGCTTTGATCTTTATTGCATTATTTGTCTTGATTAGACAACGAAGAAAAAGGCCTCAGAGGGTTCCAAGAGGAGACATAATTGGAGCGAGCAAGTTGAAAGGCCCAACTGTTTACAATTATAAGGATTTGAAGACTGCAACCAAGAATTTCAGTCAAGAAAATAAGCTAGGAGAAGGAGGATTTGGTGTTGTGTATAAGGGCACTTTGAAGAATGGAAAAGAAGTTGCAGTCAAGAAGTTAACATTTCGCCACTTATTCACAAGGATGGAGGAGGACTTTGAAAGTGAAGTGAAGCTTATAAATAATGTTCATCATCGGAATCTTACATTATCATATTATCAATTACATATTGCACTTGTTAGGGGATATACTGCACCTGAATATGCAATTCATGGCCAACTATCAGAAAAGGCTGATGTTTTCAGCTATGGCATTATTGTTTTAGAAATGATCAGTGGTCAAAGAAGTGAAGAATTGAAGATCCATGGCAATGATGAAGGCGAGTTCCTCCTTCAAAAAAGAGGAATCCATTCAGAGCTGGTGGATAAAACCTTAGACCCAAATGACTTTGATGTAGAAGAAGTGAAGAAAGTGATAGAGATTGGTTTGCTTTGCACTCAAGCACATGCTGACATAAAGCCAACGATGTCAGAAGTAGTTGTTTTGCTTCAAAACATGGCCTTACCAGAGAACATAAAACCCACCATGCCTCTCTTGATTGAAGCTACTTAA 1743 0.4406 MHRIQTCELTNLSLPKCPGPLSFSTFFILSTHGLPSRTLNSQTKLRKKKKKKLQPHLLPLITLLFCSCWILDGVVSEPQTHFLNRGCNPYAEFLVSNVTLFGENIKASLRDIREQIGDQNTHFATAQQAGASGGNTVSTLFQCRSYLSIADCVACFDVAAPQIFSCAAGDLGGHVVYDGCYLRYDISSAFFGDTTQSVNSASCGSQTTEEPATVFTSAVHQVLMNLQTATPRITAFSAATKTQVSDNGATIYAFAQCIQTITSSKCEDCLNAQYNNMQTCLPNSDGRAYANGCFLRYSTTSFFPDNQTIDITTPFFQQGSSNKGAIIGGLVGSVVALALIFIALFVLIRQRRKRPQRVPRGDIIGASKLKGPTVYNYKDLKTATKNFSQENKLGEGGFGVVYKGTLKNGKEVAVKKLTFRHLFTRMEEDFESEVKLINNVHHRNLTLSYYQLHIALVRGYTAPEYAIHGQLSEKADVFSYGIIVLEMISGQRSEELKIHGNDEGEFLLQKRGIHSELVDKTLDPNDFDVEEVKKVIEIGLLCTQAHADIKPTMSEVVVLLQNMALPENIKPTMPLLIEAT 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2200 580 Gene3D - 195 302 IPR038408 -
Prci2g2200 580 Gene3D - 80 188 IPR038408 -
Prci2g2200 580 FunFam Cysteine-rich receptor-like protein kinase 2 198 302 - -
Prci2g2200 580 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 140 446 - -
Prci2g2200 580 Pfam Salt stress response/antifungal 203 299 IPR002902 -
Prci2g2200 580 Pfam Salt stress response/antifungal 98 185 IPR002902 -
Prci2g2200 580 ProSiteProfiles Gnk2-homologous domain profile. 82 189 IPR002902 -
Prci2g2200 580 ProSitePatterns Protein kinases ATP-binding region signature. 393 416 IPR017441 GO:0005524
Prci2g2200 580 Gene3D Transferase(Phosphotransferase) domain 1 452 573 - -
Prci2g2200 580 Gene3D Phosphorylase Kinase; domain 1 364 451 - -
Prci2g2200 580 Pfam Protein kinase domain 388 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2200 580 SUPERFAMILY Protein kinase-like (PK-like) 372 568 IPR011009 -
Prci2g2200 580 ProSiteProfiles Protein kinase domain profile. 387 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2200 580 ProSiteProfiles Gnk2-homologous domain profile. 196 302 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2200 Prci-Chr2 17004444 17008985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2200 126 445 Receptor kinase-like Gene Family AT1G70530 32.927 1.03e-42 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2200 Stress-antifung 5.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2200 - - pcin:129302578 1122.46