Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2197 ATGTTTCAGCTATCAAATCTTCCCTTCTTTACCTTCATATTCTGGTCATGTTGCACTTTTAACGGCGTCGTTTCAGATCCACAGACCAATCTTCTTAAGATCCAGTGCAACCCATTCAACGAGTTCTTCATTAACAACATCTCCATCTTCAATGACAACCTACACGCAACGTTTGAAGACATCAGAGAGCAGATCAGTGACCAAAACAAGCACTTCGCCACATCACAACAGCAACGCCAAGGAGAAAACCCCGTTATCACTCTTTTTCAGTGCAGAAACTACCTTCCAATCATTGACTGCGTCGCGTGCCTCGATGCGGCTGCTGTCCGAATCCGTAGCTGCGTCGCCACCATAGCCCCTGGTGCTCATGTTGTCTATGACGGCTGCTTCCTCAGGTACAACTCCAATGGTTTCTTCGACGAGACGACGCAGGATTTCAATTTCGCATCATGTGGGAATCAGACAGCAGGAGATCAAGCACCGACATTTACCAAAACAGTTCGACAAGTTCTGATGAATCTCCAAGTAGCAACACCAAGAATCCCTAGTTTCTTTGCAGCCACGAAGATGAATGTTCCAAATGGCAAGGCTTTTGATGCTGGTTGTTTCATGAGATACTCCACCAATTCCTTCTTCAATGATAGTCAAACAATTGATATCACACCCATGACCAAACAAGGATCAAGCAAAAAGAGGGTCATAATAATTGGAGGAGTTGTTGGAGGTGCAGCTCTTGTCTTGATCATCCTTGCATTGTTTGCTAGGATTAGACGACGAAGAAGGAATGAGAGGGTTCCTAGAGGAGACATAACTGGAGCAAGCAAGTTGGAAGGTCTTGTTACTTATAATTATAATGATTTGATATCTGCAACCAATAATTTCAGTGAAGTAAACAAACTAGGAGAAGGAGGATTTGGGGCTGTATACAAGGGCACTATGAAAAACGGTAAAGTTGTGGCAGTCAAGAAATTAACTTTACAACAGTCCAGGAAGATGGAGGAGGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCGTCGGAATCTTGTTCGGCTTCTGGGATGTTGTAGTAAAGGCCATTATAAGATCCTTATTTATGAATACATGAAAAATGGCAGCCTTGACAAATTCCTATTTGGTAGAAGCAAAGGTTCTCTCAAATGGAAGCAACGATATGAAGTAATTTTAGGAATAGCAAGAGGTTTGACTTATCTACATGAAAAATTTCTTGTACGTATTATACATAGAGATATAAAGACTAACAACATCCTCTTAGATGATGATCTACAGCCTAAAATTGTAGATTTTGGGTTGGCAAAGCTTTTGCTTGAGGACAAATCTCATCTAACCACAAGAATTGCAGGAACATTGCTTGGAAACTTTATGAGCAAGACAAGCACTTGGAGTTGGTGGACGAGACCTTAG 1431 0.4144 MFQLSNLPFFTFIFWSCCTFNGVVSDPQTNLLKIQCNPFNEFFINNISIFNDNLHATFEDIREQISDQNKHFATSQQQRQGENPVITLFQCRNYLPIIDCVACLDAAAVRIRSCVATIAPGAHVVYDGCFLRYNSNGFFDETTQDFNFASCGNQTAGDQAPTFTKTVRQVLMNLQVATPRIPSFFAATKMNVPNGKAFDAGCFMRYSTNSFFNDSQTIDITPMTKQGSSKKRVIIIGGVVGGAALVLIILALFARIRRRRRNERVPRGDITGASKLEGLVTYNYNDLISATNNFSEVNKLGEGGFGAVYKGTMKNGKVVAVKKLTLQQSRKMEEDFESEVKLISNVHRRNLVRLLGCCSKGHYKILIYEYMKNGSLDKFLFGRSKGSLKWKQRYEVILGIARGLTYLHEKFLVRIIHRDIKTNNILLDDDLQPKIVDFGLAKLLLEDKSHLTTRIAGTLLGNFMSKTSTWSWWTRP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2197 476 Gene3D Transferase(Phosphotransferase) domain 1 371 466 - -
Prci2g2197 476 FunFam Os07g0541700 protein 371 458 - -
Prci2g2197 476 Gene3D Phosphorylase Kinase; domain 1 257 370 - -
Prci2g2197 476 SMART serkin_6 294 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2197 476 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 51 459 - -
Prci2g2197 476 Pfam Salt stress response/antifungal 45 135 IPR002902 -
Prci2g2197 476 ProSitePatterns Protein kinases ATP-binding region signature. 300 323 IPR017441 GO:0005524
Prci2g2197 476 SUPERFAMILY Protein kinase-like (PK-like) 279 459 IPR011009 -
Prci2g2197 476 ProSiteProfiles Protein kinase domain profile. 294 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2197 476 Pfam Protein tyrosine and serine/threonine kinase 297 450 IPR001245 GO:0004672|GO:0006468
Prci2g2197 476 ProSiteProfiles Gnk2-homologous domain profile. 29 138 IPR002902 -
Prci2g2197 476 Gene3D - 29 138 IPR038408 -
Prci2g2197 476 FunFam Cysteine-rich receptor-like protein kinase 2 258 370 - -
Prci2g2197 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2197 Prci-Chr2 16992772 16999789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2197 45 459 Receptor kinase-like Gene Family AT5G40380 35.333 6.08e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2197 PK_Tyr_Ser-Thr 1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2197 - - gmx:100811953 503.442