Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2196 ATGTTTCAGCTATCAAATCTTCCCTTCTTTACCTTCATATTCTGGTCATGTTGCACTTTTAACGGCGTCGTTTCAGATCCACAGACCAATCTTCTTAAGATCCAGTGCAACCCATTCAACGAGTTCTTCATTAACAACATCTCCATCTTCAATGACAACCTACACGCAACGTTTGAAGACATCAGAGAGCAGATCAGTGACCAAAACAAGCACTTCGCCACATCACAACAGCAACGCCAAGGAGAAAACCCCGTTATCACTCTTTTTCAGTGCAGAAACTACCTTCCAATCATTGACTGCGTCGCGTGCCTCGATGCGGCTGCTGTCCGAATCCGTAGCTGCGTCGCCACCATAGCCCCTGGTGCTCATGTTGTCTATGACGGCTGCTTCCTCAGGTACAACTCCAATGGTTTCTTCGACGAGACGACGCAGGATTTCAATTTCGCATCATGTGGGAATCAGACAGCAGGAGATCAAGCACCGACATTTACCAAAACAGTTCGACAAGTTCTGATGAATCTCCAAGTAGCAACACCAAGAATCCCTAGTTTCTTTGCAGCCACGAAGATGAATGTTCCAAATGGCAAGGCTTTTGATGCTGGTTGTTTCATGAGATACTCCACCAATTCCTTCTTCAATGATAGTCAAACAATTGATATCACACCCATGACCAAACAAGGATCAAGCAAAAAGAGGGTCATAATAATTGGAGGAGTTGTTGGAGGTGCAGCTCTTGTCTTGATCATCCTTGCATTGTTTGCTAGGATTAGACGACGAAGAAGGAATGAGAGGGTTCCTAGAGGAGACATAACTGGAGCAAGCAAGTTGGAAGGTCTTGTTACTTATAATTATAATGATTTGATATCTGCAACCAATAATTTCAGTGAAGTAAACAAACTAGGAGAAGGAGGATTTGGGGCTGTATACAAGGGCACTATGAAAAACGGTAAAGTTGTGGCAGTCAAGAAATTAACTTTACAACAGTCCAGGAAGATGGAGGAGGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCGTCGGAATCTTGTTCGGCTTCTGGGATGTTGTAGTAAAGGCCATTATAAGATCCTTATTTATGAATACATGAAAAATGGCAGCCTTGACAAATTCCTATTTGGTAGAAGCAAAGGTTCTCTCAAATGGAAGCAACGATATGAAGTAATTTTAGGAATAGCAAGAGATTTTGGGTTGGCAAAGCTTTTGCTTGAGGACAAATCTCATCTAACCACAAGAATTGCAGGAACATTGCTTGGAAACTTTATGAGCAAGACAAGCACTTGGAGTTGGTGGACGAGACCTTAG 1329 0.4236 MFQLSNLPFFTFIFWSCCTFNGVVSDPQTNLLKIQCNPFNEFFINNISIFNDNLHATFEDIREQISDQNKHFATSQQQRQGENPVITLFQCRNYLPIIDCVACLDAAAVRIRSCVATIAPGAHVVYDGCFLRYNSNGFFDETTQDFNFASCGNQTAGDQAPTFTKTVRQVLMNLQVATPRIPSFFAATKMNVPNGKAFDAGCFMRYSTNSFFNDSQTIDITPMTKQGSSKKRVIIIGGVVGGAALVLIILALFARIRRRRRNERVPRGDITGASKLEGLVTYNYNDLISATNNFSEVNKLGEGGFGAVYKGTMKNGKVVAVKKLTLQQSRKMEEDFESEVKLISNVHRRNLVRLLGCCSKGHYKILIYEYMKNGSLDKFLFGRSKGSLKWKQRYEVILGIARDFGLAKLLLEDKSHLTTRIAGTLLGNFMSKTSTWSWWTRP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2196 442 ProSitePatterns Protein kinases ATP-binding region signature. 300 323 IPR017441 GO:0005524
Prci2g2196 442 SUPERFAMILY Protein kinase-like (PK-like) 279 425 IPR011009 -
Prci2g2196 442 Gene3D Transferase(Phosphotransferase) domain 1 280 409 - -
Prci2g2196 442 FunFam Cysteine-rich receptor-like protein kinase 2 258 370 - -
Prci2g2196 442 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 51 402 - -
Prci2g2196 442 ProSiteProfiles Gnk2-homologous domain profile. 29 138 IPR002902 -
Prci2g2196 442 Pfam Protein tyrosine and serine/threonine kinase 297 402 IPR001245 GO:0004672|GO:0006468
Prci2g2196 442 ProSiteProfiles Protein kinase domain profile. 294 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2196 442 Pfam Salt stress response/antifungal 45 135 IPR002902 -
Prci2g2196 442 Gene3D - 29 138 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2196 Prci-Chr2 16992772 16999789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2196 7 425 Receptor kinase-like Gene Family AT1G70520 29.541 1.82e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2196 PK_Tyr_Ser-Thr 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2196 - - gmx:100811953 435.647