Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2190 ATGCTTCGGCCTACTAATCTCCTTCCCTTATTTACCTTCATATTCTTGTCATGCTGCAGTATTAACGGCGTCGTTTCAGATCCACAGACCAATCTTCTCAAGACCCGGTGCAACCCATACGACAGGTTCGTCGTCACCAACATCTCCATCTTCAGTGAAAACCTAAACGCAACGTTACAACACATCAGAGAGCAGATCAGCGTTCAAAACAAGTTCTTCGCCACGGCGGCAAAGGACGCCAATGGAGAAAACCCAGTCTACACTCTCTTTCAATGCAGAAACTATCTCTCCATCGCTGACTGCGTCGCATGCTTCGATGTCGCTGCTGGAGAAACCCGCAGCTGCACTGCCACCATGGCCTCGGCTGCCCTGGTCGTCTACGACGGTTGCTTCATGAGGTACAACTCCAATGGTTTCTTTGACGAGGCGCCACAGCCTTCCAATATCGTGTCGTGCGGGAATCAGACTACAGGAGAAGCCACTGCATTTACAACAACAGTGAGACAAGTGCTAATGAATCTCCAAAAAGCAACACCTAGAATCCCCCGTTTCTCTGCAGCCACGAAGATTCATGTCCCTAATAATAAGGGTGCAACTCTTTATGCTTTTGCTCAATGTGTCGATACTGTCACAGTAAAGGAGTGCCTTGATTGCTTGAAGGTTGAGTACAGCAGCGTGGAGATTTGTCTTCCCAATTCGGATGGTACGGCTTTTGATTATGGTTGTTTCATGAGATACTCCACCACTTCCTTTTTTGCCGATAACCAGACCATTGACATTACACCCTTGATCAAACAAGGTTCAAGCAATAAGGGGCCCACTATTGGTGGAGTAGTTGGTGGTATAGCTCTTGTTTTGGTACTCCTTGGATTGTTTGCCTGGATTAGACGACCTAAAAAGAAAGAGAGAATTCCTAGAGAAGGCATAATTGGAGCAAGCATGTTGAAAGGCCCAATTACTTACAGTTATAATGATTTGATGTCTGCAACCAACAATTATAGTGAAGAAAATAAACTAGGAGAGGGAGGATTCGGGGCTGTATACAAGGATGGAAAAGTTGTTGCTGTCAAGAAATTGACCTTAAACCACTCAAAGAGGATGGAGGAAGATTTTGAAAGTGAAGTGAAGCTCATCAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTGGGATGCTCTAGTAAAGGCCATGATAGAATCCTTGTTTATGAATACATGAAAAATAGCAGCCTCGACAGGTTCTTGTTCGGTGAAAGGAGAGGTTTTCTCAACTGGAAACAACGATATGATGTAATTTTAGGAATTGCAAGAGGTTTAACATATTTACATGAAGAGTTTCATGTTCGTATTATACACAGAGATGTAAAGACTTACAACATTCTCTTAGATGATGATCTTCAGCCAAAAATTGCAGATTTCGGGTTGGCAAAGCTCTTACCTAATGACATATCTCACCTTAGCACAAAAATTGTTGGAACATTGGGATATACAGCACCAGAGTATGCAATTTATGGTCACTTATCAGAAAAAGCTGATATTTATAGTTATGGTGTTGTCATCTTAGAAATCATCAGTGGTCAAAATTGCAAAGAATTAGAGCTCAACGGTGATGATGAAGGCATATTCCTAATTAAAAAGGCGTGGAAACTTTATGAGAAAGAGAAGCACTTGGAGTTAGTGGACAAAGCCCTGGACCCTAATGAATATGATGCAGAAGAAGTGAAGAAAATCATAGAGATCGGTTTGCTTTGCATCCAAGCATCTGCCGATGTAAGGCCAACGATGTCCGAAGTAGTTGCTTTGCTTCAAAACATGGATTTATTAGAGAACTTGAGACCCACCATGCCTATCTTGATTGAAATTAATTAG 1869 0.4227 MLRPTNLLPLFTFIFLSCCSINGVVSDPQTNLLKTRCNPYDRFVVTNISIFSENLNATLQHIREQISVQNKFFATAAKDANGENPVYTLFQCRNYLSIADCVACFDVAAGETRSCTATMASAALVVYDGCFMRYNSNGFFDEAPQPSNIVSCGNQTTGEATAFTTTVRQVLMNLQKATPRIPRFSAATKIHVPNNKGATLYAFAQCVDTVTVKECLDCLKVEYSSVEICLPNSDGTAFDYGCFMRYSTTSFFADNQTIDITPLIKQGSSNKGPTIGGVVGGIALVLVLLGLFAWIRRPKKKERIPREGIIGASMLKGPITYSYNDLMSATNNYSEENKLGEGGFGAVYKDGKVVAVKKLTLNHSKRMEEDFESEVKLISNVHHRNLVRLLGCSSKGHDRILVYEYMKNSSLDRFLFGERRGFLNWKQRYDVILGIARGLTYLHEEFHVRIIHRDVKTYNILLDDDLQPKIADFGLAKLLPNDISHLSTKIVGTLGYTAPEYAIYGHLSEKADIYSYGVVILEIISGQNCKELELNGDDEGIFLIKKAWKLYEKEKHLELVDKALDPNEYDAEEVKKIIEIGLLCIQASADVRPTMSEVVALLQNMDLLENLRPTMPILIEIN 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2190 622 CDD TM_EGFR-like 271 303 - -
Prci2g2190 622 ProSiteProfiles Gnk2-homologous domain profile. 30 139 IPR002902 -
Prci2g2190 622 FunFam Cysteine-rich receptor-like protein kinase 2 406 610 - -
Prci2g2190 622 Pfam Protein kinase domain 333 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2190 622 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Prci2g2190 622 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Prci2g2190 622 Pfam Salt stress response/antifungal 152 248 IPR002902 -
Prci2g2190 622 Pfam Salt stress response/antifungal 46 136 IPR002902 -
Prci2g2190 622 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2190 622 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 311 405 - -
Prci2g2190 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Prci2g2190 622 SMART serkin_6 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2190 622 Gene3D - 30 139 IPR038408 -
Prci2g2190 622 Gene3D - 147 251 IPR038408 -
Prci2g2190 622 SUPERFAMILY Protein kinase-like (PK-like) 314 602 IPR011009 -
Prci2g2190 622 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Prci2g2190 622 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Prci2g2190 622 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 619 - -
Prci2g2190 622 Gene3D Phosphorylase Kinase; domain 1 299 405 - -
Prci2g2190 622 CDD STKc_IRAK 339 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2190 Prci-Chr2 16978568 16982409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2190 4 620 Receptor kinase-like Gene Family AT1G70520 35.459 6.76e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2190 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2190 - - gmx:100813585 746.117