Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2188 ATGCTCGGACCTCATTGTAATCTGCTTCCGTTACTTACCTTCATAGTCTGGTCATGTTGCAGTCTCGACGGCGTCGCTTCAGAACCACAAATTCATCTTCTTAGTGCCCGGTGCAACCCACCTGACTTCTTTCTTGTTTCCAACTCGTCTATCCTCACGGAAAACCTAAACGCAACGTTTCGGGACATCAGAGGCCAAATCATGGATCAGAAGAAGCACTTCGCCACGGCACAGAAAGGCAATGGCGAAAATTTCCCAGTTTACACACTTTTTCAATGCAGAAACTACCTTTCCACCGCTGACTGTGCCGCCTGCTTCGACGTCGCTGCCGTCCAGATCCGCACCTGTTCTGCCGCCACGTCACCCTCTCCGGGTGCCTATGTCGTCTACGACGGCTGCTTCATCAGGTACAATTATAACACTTTCTTTAACGAGGCAACGCAAACTTTCGACGGTGTATCATGTGGGAATGAAACTACAGGAGGGGCCTCATCAGCATTCACCGAAGCAATACAACGACTGCTAACCAATCTCCAAATAGCAACACCTACAATCCCTAGTTTCTTCGCAGCCACGAAGATGAACGTTTCAAATAATGGTGCAACTGTTTATGCCTTCGCTCAATGTGTTGAGACTATCACAACGAAGGGGTGCCTAGATTGCTTGAAGGCTGGGTACAGTAATCTGCAGATTTGTCTTCCCTTTTCAGATGGTCGAGCTTTCGATGCAGGCTGTTTCATGAGATATTCCACTACTTCACTTTTTCATGATAACCAGACAATTGACATCACACCCTTGGTTAAAAAAGGTTCAAGCAACAAATTAGGGAAAACTATTGGTGGAATTGTTGGTGTAGTTCTTGCTTTGATCCTCCTTGCATTGTTTGCCTGGATTAGACAACCAAAAGGAAATAAGACGGTTCCTAGAGGAAGCAACATGAAAAGCGACTTAACTGAAGTAAGCAAGTTGAAAGGCCCAGTCACTTACAGTTATAACGATTTGATGCTGGCAACAAAAAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGGGTTGTATACAAGGGCACTTTGAAGAATGGGAAAGTTATTGCAGTCAAGAAATTGACTTTACACCACTTCAATAGAGTGGAGGAAGATTTTGAAAGTGAAGTGACCCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGGCTTTTGGGATGTTGTAGTAGAGGCCACAACAGAATCCTTGTCTATGAATACATGAAAAATAGCAGTCTTGACAAATTCTTATTCGGTAACAAGAAAGGTTCTCTCAATTGGAAGCAGCGATATGATATAACTTTAGGAATAGCAAGAGATGATGATCTACAACCTAAGATTGCTGATTTTGGACTAGCAAGACTTTTACCTGGAGATAAAACTCATGTAAGCACAAAACTCGCAGGAACATTAGGATATACAGCACCAGAGTATGCAATCCATGGCCAGTTGTCGGAGAAAGCTGATATCTACAGCTATGGTGTTGTAGTTCTAGAAATAATCAGTGGTCAAAAATGCAGAGAATTAAATGTTGATGGTGATGATGAAGGGGCATTCCTTCTTCAAAGAGCTTGGAGGCTATATGAGAAAGAGAGGCATTTAGAGTTGGTGGACAAGACCTTAGACCCTAATGGTTATGATGCCGAAGAAGTAAAGAAAACCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGATATAAGGCCGATGATGTCTGAAGTAGTTGCTCTGCTTCAAAACAAGGATTTATTAGAGAACATAAGGCCCACTATGCCTATCTTGATTGAAACTAATTAG 1830 0.4251 MLGPHCNLLPLLTFIVWSCCSLDGVASEPQIHLLSARCNPPDFFLVSNSSILTENLNATFRDIRGQIMDQKKHFATAQKGNGENFPVYTLFQCRNYLSTADCAACFDVAAVQIRTCSAATSPSPGAYVVYDGCFIRYNYNTFFNEATQTFDGVSCGNETTGGASSAFTEAIQRLLTNLQIATPTIPSFFAATKMNVSNNGATVYAFAQCVETITTKGCLDCLKAGYSNLQICLPFSDGRAFDAGCFMRYSTTSLFHDNQTIDITPLVKKGSSNKLGKTIGGIVGVVLALILLALFAWIRQPKGNKTVPRGSNMKSDLTEVSKLKGPVTYSYNDLMLATKNFSEENKLGEGGFGVVYKGTLKNGKVIAVKKLTLHHFNRVEEDFESEVTLISNVHHRNLVRLLGCCSRGHNRILVYEYMKNSSLDKFLFGNKKGSLNWKQRYDITLGIARDDDLQPKIADFGLARLLPGDKTHVSTKLAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGQKCRELNVDGDDEGAFLLQRAWRLYEKERHLELVDKTLDPNGYDAEEVKKTIEIGLLCTQASADIRPMMSEVVALLQNKDLLENIRPTMPILIETN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2188 609 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Prci2g2188 609 FunFam Cysteine-rich receptor-like protein kinase 2 309 417 - -
Prci2g2188 609 FunFam Cysteine-rich receptor-like protein kinase 2 151 254 - -
Prci2g2188 609 ProSiteProfiles Gnk2-homologous domain profile. 31 142 IPR002902 -
Prci2g2188 609 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Prci2g2188 609 SUPERFAMILY Protein kinase-like (PK-like) 324 596 IPR011009 -
Prci2g2188 609 Gene3D - 32 142 IPR038408 -
Prci2g2188 609 Gene3D - 149 253 IPR038408 -
Prci2g2188 609 Pfam Protein tyrosine and serine/threonine kinase 454 588 IPR001245 GO:0004672|GO:0006468
Prci2g2188 609 Pfam Protein tyrosine and serine/threonine kinase 344 449 IPR001245 GO:0004672|GO:0006468
Prci2g2188 609 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 449 - -
Prci2g2188 609 Gene3D Phosphorylase Kinase; domain 1 305 417 - -
Prci2g2188 609 Gene3D Transferase(Phosphotransferase) domain 1 447 602 - -
Prci2g2188 609 Pfam Salt stress response/antifungal 155 251 IPR002902 -
Prci2g2188 609 Pfam Salt stress response/antifungal 52 138 IPR002902 -
Prci2g2188 609 ProSiteProfiles Protein kinase domain profile. 341 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2188 Prci-Chr2 16947610 16952915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2188 9 607 Receptor kinase-like Gene Family AT1G70520 33.438 2.52e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2188 PK_Tyr_Ser-Thr 9.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2188 - - pcin:129300003 731.48