Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2187 ATGTTGCTATACCTGCAACAAAAGCCCTGCTTCATCTTCTTTCTCTTAAGTTTCATAATCTGGTCATGGGGGACACTGGACGGCGTCGTTTCGGACCCACAGACCAACTTTGTGAAACTAGGGTGCAGCCAATACAACGTGACAGACTTGTCCATCTTCAGTGATAACTTAAACTTAACACTGCGAGACCTGAGAGCGCAGATCAGCAACCAAAGTAAGCACTTCGCGACGGCGCAGGCGGTGAAGGGTAACAATCCAGCGTACGGCCTTTTTCAGTGCAGAAACTACCTCTCCATCTCCGACTGTCTCAAGTGCTTCGATTTCGCCGCCGTTCACATACGCAACTGCTCTGTCGGCGTTACCGGTGCTCGTATCATCTACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTGGATTCTTCGATCAGAACACAGACGCTGGAAACAACATAATCTGTGGAAATGGGACGATCACAAACGCCACTGAACTTGCTTCAACTGTGCAACAAGTGTTAACGGATCTGGACATAGCAACACCAAGAATCACTGGTTACTATGCAGCCACTGAAACGTCTGTTCCTAACAGTAATGGTTCAAGCATTTATGCCATTGCTCAATGTATTGAGACTCTTACACAAATTGGCTGCCAGGATTGCCTCAACATTGCCTTAAGAAATTTTCAGATCTGTCTTCCCAACTCTAATGCTAAAACCTATGATGCTGGTTGTTTCATGAGATACTCCACTAGAGCCTTCTTTGCTGACAATCAAACCATTAATATTAGGCCCTTCTTGAAGCAAGGAGGTTCAAGCAAGAGGAAGGCCATTATTGGGGGAGTGGTTGGAGGAGGATCGTTTATTTTGATTCTTCTTGCATTATTTGCTTTGCACAGACGATCAACGTCATCCAAGAAGATTCATAGAGGTGATATCTTAGGAGCAACTGAGTTGAAGGGCCCAATTAATTATAGGTATAATGATCTTAAGAAGGCCACAAAAAATTTCAGCAAAGAAAATAAACTAGGAGAAGGAGGCTTTGGTGATGTATACAAGGGCACTCTCAAAAATGGGAAAGTGGTTGCTGTCAAGAAATTGGCTTTAGGGCAATCCAAACAGATGGAGAAAGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTCCGGCTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGACTTCTTGTTTATGAGTACATGAAGAACAACAATGTTGGCACCTTCTTGTTTGGTAGGCAAAAAAGCTCCCTCAACTGGAAGCAACGTTACAATATAATTTTAGGCACAGCAAAGGGTTTGGCCTATTTGCATGAGGAATTTCATGTGTGTATCATACATAGAGATATAAAGACTAGTAATATTCTTTTGGATGATGATTTGCAACCTAAAATTGCTGACTTTGGATTGGCAAGGCTCCTTCCACATGATCTATCTCATCTCAACACAAAATTCGCGGGAACAATGGGATATACAGCGCCTGAGTATGCAATGCATGGACAACTATCAGAAAAGGCCGATACCTATAGTTATGGCGTTGTAGTCCTAGAAATCATAAGTGGACAAAAGAGTGGTGAAGCAAAGGCTAATGATGAAGGCGAATTCCTCCTTCAAAGAGCTTGGAAACTCTATGATAAAGGCACGCACTTAGATTTTGTGGACGAAACCTTAGACCCTAATGAGTATGATGCAGAGGAACTAAAGAAAATCATAGAGATTGCTTTGCTTTGCACTCAAGCATCTCCTGCAACGAGGCCAACAATGTCTGAAATTGTTATTATGCTCAAAGGAAAGGGCTTAATGGAGAACAGGAGACCCACTATGCCTGTCTATGTTGACCCCAATTTTAATCCCAGAAGAGAGTCTTCAACCTCTAATAATTCATCTTCATCAAATGCTACTGCCTCCACCATTGCTCTGTCTGGAAGGTGA 1962 0.4271 MLLYLQQKPCFIFFLLSFIIWSWGTLDGVVSDPQTNFVKLGCSQYNVTDLSIFSDNLNLTLRDLRAQISNQSKHFATAQAVKGNNPAYGLFQCRNYLSISDCLKCFDFAAVHIRNCSVGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIICGNGTITNATELASTVQQVLTDLDIATPRITGYYAATETSVPNSNGSSIYAIAQCIETLTQIGCQDCLNIALRNFQICLPNSNAKTYDAGCFMRYSTRAFFADNQTINIRPFLKQGGSSKRKAIIGGVVGGGSFILILLALFALHRRSTSSKKIHRGDILGATELKGPINYRYNDLKKATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMKNNNVGTFLFGRQKSSLNWKQRYNIILGTAKGLAYLHEEFHVCIIHRDIKTSNILLDDDLQPKIADFGLARLLPHDLSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSYGVVVLEIISGQKSGEAKANDEGEFLLQRAWKLYDKGTHLDFVDETLDPNEYDAEELKKIIEIALLCTQASPATRPTMSEIVIMLKGKGLMENRRPTMPVYVDPNFNPRRESSTSNNSSSSNATASTIALSGR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2187 653 FunFam Cysteine-rich receptor-like protein kinase 2 411 613 - -
Prci2g2187 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Prci2g2187 653 MobiDBLite consensus disorder prediction 619 653 - -
Prci2g2187 653 FunFam Cysteine-rich receptor-like protein kinase 2 34 139 - -
Prci2g2187 653 CDD STKc_IRAK 340 607 - -
Prci2g2187 653 FunFam Cysteine-rich receptor-like protein kinase 2 147 251 - -
Prci2g2187 653 SMART serkin_6 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2187 653 Gene3D Transferase(Phosphotransferase) domain 1 411 617 - -
Prci2g2187 653 MobiDBLite consensus disorder prediction 627 653 - -
Prci2g2187 653 Pfam Salt stress response/antifungal 156 248 IPR002902 -
Prci2g2187 653 Pfam Salt stress response/antifungal 42 136 IPR002902 -
Prci2g2187 653 Gene3D - 147 251 IPR038408 -
Prci2g2187 653 Gene3D - 34 139 IPR038408 -
Prci2g2187 653 FunFam Cysteine-rich receptor-like protein kinase 2 299 410 - -
Prci2g2187 653 Pfam Protein tyrosine and serine/threonine kinase 336 603 IPR001245 GO:0004672|GO:0006468
Prci2g2187 653 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Prci2g2187 653 ProSiteProfiles Protein kinase domain profile. 334 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2187 653 Gene3D Phosphorylase Kinase; domain 1 297 410 - -
Prci2g2187 653 SUPERFAMILY Protein kinase-like (PK-like) 317 605 IPR011009 -
Prci2g2187 653 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
Prci2g2187 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 640 - -
Prci2g2187 653 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2187 Prci-Chr2 16939646 16945068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2187 3 649 Receptor kinase-like Gene Family AT1G70520 36.682 4.24e-131 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2187 PK_Tyr_Ser-Thr 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2187 - - gmx:100811953 872.848