Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2185 ATGCGCCAACCTATTACTCTCCTGCTTCCCTTATTTACTACCTTCTTCATATTCTGCTCCCTCCACGGCGCCGTTTCGGACCCCCAGACCTATCTTCTAAGCCTTGACTGCTACCAATATGACAGAGATGAATATGATGCTAATAAATCCTTCAATGACAGCGTAAGCGCAGCTCTTCGTGACCTCAGATATCAGGTGGCGAACCAGAGAATGTCCTTCGCCACCTCAGAGCAGTGGTGGGGTACCGACATAAGCCTCACCTTTTATGCTGTCTTCTTATGCCGAAACTACCTCTCCGTCGCCGACTGCGTCGCCTGCTTCACCGATGCTGCAGCTGAAATCCTCAACTGCTCCGCCGGGACTAGCTTTGCCCGTGTCATCTACGACGGCTGCTTCCTCAGATGGTCGATCCAACAGGGGATTGGGAGAGCAGAGAGCTGCTGGAGACGATCGGGTCCTATATCTTGCCAAAGGTATGAGGATACCAATTTTAGGGACGAGCCAAAGAGTATTGCAAATCCTGCGTTGTGTGGGAAACAGACTCCAGAAGCAGCCGCAGGATTTACTTCAGCTGCTCAACAACTCTTAATGAATGTTCAAACAACAACACCCAACGTCACTGGTTTCCAGGCGGCTGTTAAGACTCAAGTGTCTAATAATGGACCAACCATCTATGCCTATGCTCAATGTATTCAAAGTCTCTCACAGAGTGAGTGCGAGATTTGCTTGATGCAAGGTTACAACACTCTGCAGACTTGTCTTCCCGGTTCAGATGGTAGGGCTTATGTAGATGGCTGTTTCATGAGATACTCCACCACTTTCTTCTTTCCCGATGACCAGACCATTATTATCACTCCTTTAGCCATACGAGGTTCAAGCAAGAAGGGGGCAATTATTGGTGCAATTGTTGGAGGGGTAGCTTTTGTTCTTATCCTCCTTGCACTATTGGCTTATATTAGACGATCAAAAAGGCGTGAGAGAGTTTCTAACGCTAATGGAGACATAATTGGAGAGAGCAGCAATTTGATAGGCAGCCCAGTTAATTACAGCTATGGGGATTTGAGGTTTGCAACAAAAAACTTCAGTGTAGAAAATAAACTTGGAGAAGGAGGATTTGGTGTTGTATATAAGGGCACTTTAAAAAATGGAAAAGTTGTTGCAGTCAAGAAATTAACTTTATGCTACTCCAAGAGAGTGGAGGAAGAATTTCAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCAACTTCTTGGATGTTGCAGTAAAGGCAGTGAGAGAATACTTGTTTATGAATACATGAAAAACACCAGTTTGGATAGATTCTTATTTGAGGATATGCAGCTCCAAAATATGTGA 1371 0.4471 MRQPITLLLPLFTTFFIFCSLHGAVSDPQTYLLSLDCYQYDRDEYDANKSFNDSVSAALRDLRYQVANQRMSFATSEQWWGTDISLTFYAVFLCRNYLSVADCVACFTDAAAEILNCSAGTSFARVIYDGCFLRWSIQQGIGRAESCWRRSGPISCQRYEDTNFRDEPKSIANPALCGKQTPEAAAGFTSAAQQLLMNVQTTTPNVTGFQAAVKTQVSNNGPTIYAYAQCIQSLSQSECEICLMQGYNTLQTCLPGSDGRAYVDGCFMRYSTTFFFPDDQTIIITPLAIRGSSKKGAIIGAIVGGVAFVLILLALLAYIRRSKRRERVSNANGDIIGESSNLIGSPVNYSYGDLRFATKNFSVENKLGEGGFGVVYKGTLKNGKVVAVKKLTLCYSKRVEEEFQSEVKLISNVHHRNLVQLLGCCSKGSERILVYEYMKNTSLDRFLFEDMQLQNM 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2185 456 Gene3D - 172 275 IPR038408 -
Prci2g2185 456 Gene3D - 34 139 IPR038408 -
Prci2g2185 456 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Prci2g2185 456 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Prci2g2185 456 ProSiteProfiles Protein kinase domain profile. 361 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2185 456 Pfam Protein tyrosine and serine/threonine kinase 363 450 IPR001245 GO:0004672|GO:0006468
Prci2g2185 456 FunFam Cysteine-rich receptor-like protein kinase 2 324 437 - -
Prci2g2185 456 SUPERFAMILY Protein kinase-like (PK-like) 340 451 IPR011009 -
Prci2g2185 456 ProSiteProfiles Gnk2-homologous domain profile. 170 275 IPR002902 -
Prci2g2185 456 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 450 - -
Prci2g2185 456 Pfam Salt stress response/antifungal 37 136 IPR002902 -
Prci2g2185 456 Pfam Salt stress response/antifungal 182 272 IPR002902 -
Prci2g2185 456 Gene3D Phosphorylase Kinase; domain 1 323 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2185 Prci-Chr2 16877576 16882569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2185 85 455 Receptor kinase-like Gene Family AT1G70530 34.375 1.49e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2185 Stress-antifung 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2185 - - pcin:129301051 884.019