Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2183 ATGCGCCAACCTATTACTCTCCTGCTTCCCTTATTTACTACCTTCTTCATATTCTGCTCCCTCCACGGCGCCGTTTCGGACCCCCAGACCTATCTTCTAAGCCTTGACTGCTACCAATATGACAGAGATGAATATGATGCTAATAAATCCTTCAATGACAGCGTAAGCGCAGCTCTTCGTGACCTCAGATATCAGGTGGCGAACCAGAGAATGTCCTTCGCCACCTCAGAGCAGTGGTGGGGTACCGACATAAGCCTCACCTTTTATGCTGTCTTCTTATGCCGAAACTACCTCTCCGTCGCCGACTGCGTCGCCTGCTTCACCGATGCTGCAGCTGAAATCCTCAACTGCTCCGCCGGGACTAGCTTTGCCCGTGTCATCTACGACGGCTGCTTCCTCAGATGGTCGATCCAACAGGGGATTGGGAGAGCAGAGAGCTGCTGGAGACGATCGGGTCCTATATCTTGCCAAAGGTATGAGGATACCAATTTTAGGGACGAGCCAAAGAGTATTGCAAATCCTGCGTTGTGTGGGAAACAGACTCCAGAAGCAGCCGCAGGATTTACTTCAGCTGCTCAACAACTCTTAATGAATGTTCAAACAACAACACCCAACGTCACTGGTTTCCAGGCGGCTGTTAAGACTCAAGTGTCTAATAATGGACCAACCATCTATGCCTATGCTCAATGTATTCAAAGTCTCTCACAGAGTGAGTGCGAGATTTGCTTGATGCAAGGTTACAACACTCTGCAGACTTGTCTTCCCGGTTCAGATGGTAGGGCTTATGTAGATGGCTGTTTCATGAGATACTCCACCACTTTCTTCTTTCCCGATGACCAGACCATTATTATCACTCCTTTAGCCATACGAGGTTCAAGCAAGAAGGGGGCAATTATTGGTGCAATTGTTGGAGGGGTAGCTTTTGTTCTTATCCTCCTTGCACTATTGGCTTATATTAGACGATCAAAAAGGCGTGAGAGAGTTTCTAACGCTAATGGAGACATAATTGGAGAGAGCAGCAATTTGATAGGCAGCCCAGTTAATTACAGCTATGGGGATTTGAGGTTTGCAACAAAAAACTTCAGTGTAGAAAATAAACTTGGAGAAGGAGGATTTGGTGTTGTATATAAGGGCACTTTAAAAAATGGAAAAGTTGTTGCAGTCAAGAAATTAACTTTATGCTACTCCAAGAGAGTGGAGGAAGAATTTCAAAGTGAAGTGAAGCTTATAAAGGATATGCAGCTCCAAAATATGTGA 1257 0.4566 MRQPITLLLPLFTTFFIFCSLHGAVSDPQTYLLSLDCYQYDRDEYDANKSFNDSVSAALRDLRYQVANQRMSFATSEQWWGTDISLTFYAVFLCRNYLSVADCVACFTDAAAEILNCSAGTSFARVIYDGCFLRWSIQQGIGRAESCWRRSGPISCQRYEDTNFRDEPKSIANPALCGKQTPEAAAGFTSAAQQLLMNVQTTTPNVTGFQAAVKTQVSNNGPTIYAYAQCIQSLSQSECEICLMQGYNTLQTCLPGSDGRAYVDGCFMRYSTTFFFPDDQTIIITPLAIRGSSKKGAIIGAIVGGVAFVLILLALLAYIRRSKRRERVSNANGDIIGESSNLIGSPVNYSYGDLRFATKNFSVENKLGEGGFGVVYKGTLKNGKVVAVKKLTLCYSKRVEEEFQSEVKLIKDMQLQNM 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2183 418 Gene3D Phosphorylase Kinase; domain 1 336 418 - -
Prci2g2183 418 ProSiteProfiles Protein kinase domain profile. 361 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2183 418 ProSiteProfiles Gnk2-homologous domain profile. 170 275 IPR002902 -
Prci2g2183 418 Pfam Protein tyrosine and serine/threonine kinase 363 417 IPR001245 GO:0004672|GO:0006468
Prci2g2183 418 SUPERFAMILY Protein kinase-like (PK-like) 342 417 IPR011009 -
Prci2g2183 418 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Prci2g2183 418 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Prci2g2183 418 Pfam Salt stress response/antifungal 37 136 IPR002902 -
Prci2g2183 418 Pfam Salt stress response/antifungal 182 272 IPR002902 -
Prci2g2183 418 Gene3D - 34 139 IPR038408 -
Prci2g2183 418 Gene3D - 172 275 IPR038408 -
Prci2g2183 418 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2183 Prci-Chr2 16877576 16882569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2183 85 418 Receptor kinase-like Gene Family AT1G70530 31.304 9.70e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2183 Stress-antifung 7.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2183 - - pcin:129301051 793.497