Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2182 ATGCGCCAACCTATTACTCTCCTGCTTCCCTTATTTACTACCTTCTTCATATTCTGCTCCCTCCACGGCGCCGTTTCGGACCCCCAGACCTATCTTCTAAGCCTTGACTGCTACCAATATGACAGAGATGAATATGATGCTAATAAATCCTTCAATGACAGCGTAAGCGCAGCTCTTCGTGACCTCAGATATCAGGTGGCGAACCAGAGAATGTCCTTCGCCACCTCAGAGCAGTGGTGGGGTACCGACATAAGCCTCACCTTTTATGCTGTCTTCTTATGCCGAAACTACCTCTCCGTCGCCGACTGCGTCGCCTGCTTCACCGATGCTGCAGCTGAAATCCTCAACTGCTCCGCCGGGACTAGCTTTGCCCGTGTCATCTACGACGGCTGCTTCCTCAGATGGTCGATCCAACAGGGGATTGGGAGAGCAGAGAGCTGCTGGAGACGATCGGGTCCTATATCTTGCCAAAGGTATGAGGATACCAATTTTAGGGACGAGCCAAAGAGTATTGCAAATCCTGCGTTGTGTGGGAAACAGACTCCAGAAGCAGCCGCAGGATTTACTTCAGCTGCTCAACAACTCTTAATGAATGTTCAAACAACAACACCCAACGTCACTGGTTTCCAGGCGGCTGTTAAGACTCAAGTGTCTAATAATGGACCAACCATCTATGCCTATGCTCAATGTATTCAAAGTCTCTCACAGAGTGAGTGCGAGATTTGCTTGATGCAAGGTTACAACACTCTGCAGACTTGTCTTCCCGGTTCAGATGGTAGGGCTTATGTAGATGGCTGTTTCATGAGATACTCCACCACTTTCTTCTTTCCCGATGACCAGACCATTATTATCACTCCTTTAGCCATACGAGGTTCAAGCAAGAAGGGGGCAATTATTGGTGCAATTGTTGGAGGGGTAGCTTTTGTTCTTATCCTCCTTGCACTATTGGCTTATATTAGACGATCAAAAAGGCGTGAGAGAGTTTCTAACGCTAATGGAGACATAATTGGAGAGAGCAGCAATTTGATAGGCAGCCCAGTTAATTACAGCTATGGGGATTTGAGGTTTGCAACAAAAAACTTCAGTGTAGAAAATAAACTTGGAGAAGGAGGATTTGGTGTTGTATATAAGGGCACTTTAAAAAATGGAAAAGTTGTTGCAGTCAAGAAATTAACTTTATGCTACTCCAAGAGAGTGGAGGAAGAATTTCAAAGTGAAGTGAAGCTTATAAGCTTGGAGACTATATGA 1248 0.4575 MRQPITLLLPLFTTFFIFCSLHGAVSDPQTYLLSLDCYQYDRDEYDANKSFNDSVSAALRDLRYQVANQRMSFATSEQWWGTDISLTFYAVFLCRNYLSVADCVACFTDAAAEILNCSAGTSFARVIYDGCFLRWSIQQGIGRAESCWRRSGPISCQRYEDTNFRDEPKSIANPALCGKQTPEAAAGFTSAAQQLLMNVQTTTPNVTGFQAAVKTQVSNNGPTIYAYAQCIQSLSQSECEICLMQGYNTLQTCLPGSDGRAYVDGCFMRYSTTFFFPDDQTIIITPLAIRGSSKKGAIIGAIVGGVAFVLILLALLAYIRRSKRRERVSNANGDIIGESSNLIGSPVNYSYGDLRFATKNFSVENKLGEGGFGVVYKGTLKNGKVVAVKKLTLCYSKRVEEEFQSEVKLISLETI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2182 415 SUPERFAMILY Protein kinase-like (PK-like) 342 411 IPR011009 -
Prci2g2182 415 Pfam Salt stress response/antifungal 182 272 IPR002902 -
Prci2g2182 415 Pfam Salt stress response/antifungal 37 136 IPR002902 -
Prci2g2182 415 ProSiteProfiles Gnk2-homologous domain profile. 170 275 IPR002902 -
Prci2g2182 415 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Prci2g2182 415 ProSiteProfiles Protein kinase domain profile. 361 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2182 415 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Prci2g2182 415 Gene3D Phosphorylase Kinase; domain 1 336 413 - -
Prci2g2182 415 Gene3D - 34 139 IPR038408 -
Prci2g2182 415 Gene3D - 172 275 IPR038408 -
Prci2g2182 415 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2182 Prci-Chr2 16877576 16882569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2182 85 411 Receptor kinase-like Gene Family AT1G70530 31.953 2.58e-35 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci2g2182 Stress-antifung 7.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2182 - - pcin:129301051 791.956