Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2180 ATGATTCAACGTCCTGTTACTCTCCTTCTTCCCTTAGTTACTACTTTCGTATTCCGTTACGGCGTCGTTTCCGACCCTCAGACCAATCTCCTCAACACTGGCTGCTTTCCGTACATAAAATTGGATCCAGTAGCTGCTAATTCGTTCAATCAAAGCCTAAACGCAGCGTTTGGAGATCTCAGGGATCAGGTCTTCAACCAGAGCAAGCACTTCGCCACGGCGCAGCGAGCCAACGGAGCCACCCCTCTTTTCGCTCTTTATCAGTGCAGGAGTTACCTCTCCGTCGCCGACTGTGTCGCCTGCTTCACCGTCGCTTCCGCTCATATCAGAAACTGCTCTGCCGGGACCACCGCTGCTCGTGTCATCTATGACGGCTGCTTCCTCAGGTATGAGAGCAGCAGTTTCTTTGACCAAGCAACAGGATCTTTCGATTCTGCATCATGTGGAAATCAGAATGCAGAAGCAGCCACAACATTTAACTCAACTATTCAACAAGTGCTAATGAGTCTCCAAACAGAAACACCCAGAATCACTGGTTTCTCTGCAGCTACAAAGATTCTAGTGCCCAATAACAGCACAACCATTTATGCCTATGCTCAATGTATTGGAACTATCTCTCAGAGTGGGTGCGAGGATTGCCTGAAGCAAGAGTACAACACTGTGCAGACTTGCCTACCCAGTTCAGATGGTAGGGCTTTTGATGCTGGGTGTTTCATGAGATACTCCACAACTTCCTTCTTTCCTGATAACCAGACGATTAATATCACACCCTCCAAACAAGGTTCAAGTAAAAATGATAAGGGAGCCATTATTGGTGGAGTTGTTGGAGGTGTAGCTCTTGCTTTGGTTCTTATTGCATCATTAGCCTGGATGCAGATTAGACGGTCAAAAAGGTCTGAAAGAGCTCCTAGAGGTGAGATAATGGGAGAATCCAAGTTGAAGGGCCCTATTAATTACAATTATAATGATTTGAAGTCTGCAACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTACCGTATACAAGGGCACTTTGAAAAATGGAAAAATAGTTGCAGTGAAGAAATTACTTATGCGCCAATCCAATAGGATGGATGAAGAATTTGAGAGTGAAGTAAGGCTGATAAGTAATGTCCATCATCGAAATCTTGTTCGACTTCTAGGATGTTGCAATAAAGGCAATAAGAGAATTCTTGTTTACGAGTACATGAGAAACAACAGTCTCGACAGATTCATATTTGGTAACAAGAAAGGTTCTCTCAACTGGAAGCAACGATATGATATAATCTTAGGCATAGCAAGGGGATTGACCTATCTACATGAGGAATTTCACATTTGTATTATACATAGAGATATAAAGACTAGCAACATTCTCCTCGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGGGGATCAAACTCATCTTAGCACTAGATTTGCAGGAACATTGGGATATACGGCACCTGAATATGCACTTCATGGGCAGTTATCAGAAAAAGCTGATACTTACAGCTATGGTGTGATAGTCTTAGAAATCATCAGTGGTCAGAGAAACAGTGAACTAAAGATTGATGCTCATGTTGAAGGCGAATTCCTCCTTCAACAAGCTTGGAAGCTATATGAGAAAAGCAGGCACTTGGAGTTGGTGGACAATACCTTAGACCCTAATGAATATGACGCCAAGGAATTAGAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTCCTGCAATAAGACCAACAATGTCTGAAGTAGTTGGTTTGCTCCAAAGTAAAGGCTTATCAAAGAATATGAGACCCACTATGCCTCTCTTTGTTGAAACTGATTCAGGGTCCAAGGGAGACACTTCTACCTATACTGCTTCCTCAACATCAAATGCTACTTACTCTACTTCCATGATATCAGCAAGATCATGA 1962 0.4246 MIQRPVTLLLPLVTTFVFRYGVVSDPQTNLLNTGCFPYIKLDPVAANSFNQSLNAAFGDLRDQVFNQSKHFATAQRANGATPLFALYQCRSYLSVADCVACFTVASAHIRNCSAGTTAARVIYDGCFLRYESSSFFDQATGSFDSASCGNQNAEAATTFNSTIQQVLMSLQTETPRITGFSAATKILVPNNSTTIYAYAQCIGTISQSGCEDCLKQEYNTVQTCLPSSDGRAFDAGCFMRYSTTSFFPDNQTINITPSKQGSSKNDKGAIIGGVVGGVALALVLIASLAWMQIRRSKRSERAPRGEIMGESKLKGPINYNYNDLKSATKNFSEKNKLGEGGFGTVYKGTLKNGKIVAVKKLLMRQSNRMDEEFESEVRLISNVHHRNLVRLLGCCNKGNKRILVYEYMRNNSLDRFIFGNKKGSLNWKQRYDIILGIARGLTYLHEEFHICIIHRDIKTSNILLDDDFQPKIADFGLARLLPGDQTHLSTRFAGTLGYTAPEYALHGQLSEKADTYSYGVIVLEIISGQRNSELKIDAHVEGEFLLQQAWKLYEKSRHLELVDNTLDPNEYDAKELEKIIEIGLLCTQASPAIRPTMSEVVGLLQSKGLSKNMRPTMPLFVETDSGSKGDTSTYTASSTSNATYSTSMISARS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2180 653 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Prci2g2180 653 FunFam Cysteine-rich receptor-like protein kinase 2 408 612 - -
Prci2g2180 653 Gene3D - 41 135 IPR038408 -
Prci2g2180 653 Gene3D - 141 246 IPR038408 -
Prci2g2180 653 ProSiteProfiles Protein kinase domain profile. 331 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2180 653 SMART serkin_6 331 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2180 653 Pfam Protein kinase domain 331 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2180 653 FunFam Cysteine-rich receptor-like protein kinase 2 144 246 - -
Prci2g2180 653 Pfam Salt stress response/antifungal 47 132 IPR002902 -
Prci2g2180 653 Pfam Salt stress response/antifungal 148 243 IPR002902 -
Prci2g2180 653 Gene3D Phosphorylase Kinase; domain 1 291 407 - -
Prci2g2180 653 CDD STKc_IRAK 337 605 - -
Prci2g2180 653 SUPERFAMILY Protein kinase-like (PK-like) 315 620 IPR011009 -
Prci2g2180 653 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Prci2g2180 653 FunFam Cysteine-rich receptor-like protein kinase 2 295 407 - -
Prci2g2180 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 638 - -
Prci2g2180 653 Gene3D Transferase(Phosphotransferase) domain 1 408 617 - -
Prci2g2180 653 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Prci2g2180 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2180 Prci-Chr2 16849401 16857570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2180 1 652 Receptor kinase-like Gene Family AT1G70520 37.258 2.12e-132 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2180 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2180 - - gmx:100813585 829.32