Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2179 ATGATTCAACGTCCTGTTACTCTCCTTCTTCCCTTAGTTACTACTTTCGTATTCCGTTACGGCGTCGTTTCCGACCCTCAGACCAATCTCCTCAACACTGGCTGCTTTCCGTACATAAAATTGGATCCAGTAGCTGCTAATTCGTTCAATCAAAGCCTAAACGCAGCGTTTGGAGATCTCAGGGATCAGGTCTTCAACCAGAGCAAGCACTTCGCCACGGCGCAGCGAGCCAACGGAGCCACCCCTCTTTTCGCTCTTTATCAGTGCAGGAGTTACCTCTCCGTCGCCGACTGTGTCGCCTGCTTCACCGTCGCTTCCGCTCATATCAGAAACTGCTCTGCCGGGACCACCGCTGCTCGTGTCATCTATGACGGCTGCTTCCTCAGGTATGAGAGCAGCAGTTTCTTTGACCAAGCAACAGGATCTTTCGATTCTGCATCATGTGGAAATCAGAATGCAGAAGCAGCCACAACATTTAACTCAACTATTCAACAAGTGCTAATGAGTCTCCAAACAGAAACACCCAGAATCACTGGTTTCTCTGCAGCTACAAAGATTCTAGTGCCCAATAACAGCACAACCATTTATGCCTATGCTCAATGTATTGGAACTATCTCTCAGAGTGGGTGCGAGGATTGCCTGAAGCAAGAGTACAACACTGTGCAGACTTGCCTACCCAGTTCAGATGGTAGGGCTTTTGATGCTGGGTGTTTCATGAGATACTCCACAACTTCCTTCTTTCCTGATAACCAGACGATTAATATCACACCCTCCAAACAAGGTTCAAGTAAAAATGATAAGGGAGCCATTATTGGTGGAGTTGTTGGAGGTGTAGCTCTTGCTTTGGTTCTTATTGCATCATTAGCCTGGATGCAGATTAGACGGTCAAAAAGGTCTGAAAGAGCTCCTAGAGGTGAGATAATGGGAGAATCCAAGTTGAAGGGCCCTATTAATTACAATTATAATGATTTGAAGTCTGCAACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTACCGTATACAAGGGCACTTTGAAAAATGGAAAAATAGTTGCAGTGAAGAAATTACTTATGCGCCAATCCAATAGGATGGATGAAGAATTTGAGAGTGAAGTAAGGCTGATAAGTAACAAGAAAGGTTCTCTCAACTGGAAGCAACGATATGATATAATCTTAGGCATAGCAAGGGGATTGACCTATCTACATGAGGAATTTCACATTTGTATTATACATAGAGATATAAAGACTAGCAACATTCTCCTCGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGGGGATCAAACTCATCTTAGCACTAGATTTGCAGGAACATTGGGATATACGGCACCTGAATATGCACTTCATGGGCAGTTATCAGAAAAAGCTGATACTTACAGCTATGGTGTGATAGTCTTAGAAATCATCAGTGGTCAGAGAAACAGTGAACTAAAGATTGATGCTCATGTTGAAGGCGAATTCCTCCTTCAACAAGCTTGGAAGCTATATGAGAAAAGCAGGCACTTGGAGTTGGTGGACAATACCTTAGACCCTAATGAATATGACGCCAAGGAATTAGAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTCCTGCAATAAGACCAACAATGTCTGAAGTAGTTGGTTTGCTCCAAAGTAAAGGCTTATCAAAGAATATGAGACCCACTATGCCTCTCTTTGTTGAAACTGATTCAGGGTCCAAGGGAGACACTTCTACCTATACTGCTTCCTCAACATCAAATGCTACTTACTCTACTTCCATGATATCAGCAAGATCATGA 1848 0.4286 MIQRPVTLLLPLVTTFVFRYGVVSDPQTNLLNTGCFPYIKLDPVAANSFNQSLNAAFGDLRDQVFNQSKHFATAQRANGATPLFALYQCRSYLSVADCVACFTVASAHIRNCSAGTTAARVIYDGCFLRYESSSFFDQATGSFDSASCGNQNAEAATTFNSTIQQVLMSLQTETPRITGFSAATKILVPNNSTTIYAYAQCIGTISQSGCEDCLKQEYNTVQTCLPSSDGRAFDAGCFMRYSTTSFFPDNQTINITPSKQGSSKNDKGAIIGGVVGGVALALVLIASLAWMQIRRSKRSERAPRGEIMGESKLKGPINYNYNDLKSATKNFSEKNKLGEGGFGTVYKGTLKNGKIVAVKKLLMRQSNRMDEEFESEVRLISNKKGSLNWKQRYDIILGIARGLTYLHEEFHICIIHRDIKTSNILLDDDFQPKIADFGLARLLPGDQTHLSTRFAGTLGYTAPEYALHGQLSEKADTYSYGVIVLEIISGQRNSELKIDAHVEGEFLLQQAWKLYEKSRHLELVDNTLDPNEYDAKELEKIIEIGLLCTQASPAIRPTMSEVVGLLQSKGLSKNMRPTMPLFVETDSGSKGDTSTYTASSTSNATYSTSMISARS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2179 615 Gene3D - 41 135 IPR038408 -
Prci2g2179 615 Gene3D - 141 246 IPR038408 -
Prci2g2179 615 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Prci2g2179 615 FunFam Cysteine-rich receptor-like protein kinase 2 372 574 - -
Prci2g2179 615 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 386 600 - -
Prci2g2179 615 SMART serkin_6 331 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2179 615 Pfam Protein kinase domain 380 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2179 615 ProSiteProfiles Protein kinase domain profile. 264 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2179 615 Gene3D Transferase(Phosphotransferase) domain 1 382 579 - -
Prci2g2179 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Prci2g2179 615 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Prci2g2179 615 Gene3D Phosphorylase Kinase; domain 1 291 381 - -
Prci2g2179 615 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Prci2g2179 615 Pfam Salt stress response/antifungal 47 132 IPR002902 -
Prci2g2179 615 Pfam Salt stress response/antifungal 148 243 IPR002902 -
Prci2g2179 615 FunFam Cysteine-rich receptor-like protein kinase 2 144 246 - -
Prci2g2179 615 SUPERFAMILY Protein kinase-like (PK-like) 319 587 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2179 Prci-Chr2 16849401 16857571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2179 1 614 Receptor kinase-like Gene Family AT1G70520 33.681 1.32e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2179 Pkinase 4.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2179 - - gmx:100813585 744.577