Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2178 ATGCTTCAACGTGATCGTAGTCTCCTTCCCGTAGCCACCTTCATATTCTGGTCATGTTTCTGCTGCTCCTTCGACGGCGTCGTTTCGGATCCCCAGACCCTATTTTTGAACAGAGGGTGTAGCCAGTACAATGTCTCCAACTTGGCCAGCTTCAACGATAACCTAAACGCAACGTTTCGAGGGCTCAGAGACAAGGTGGCTAGGCAGAGAGCTTTCTTCGCCACGGTGAAGCAAGCCCACGGAGCTAGCCCCGTCTACGCTCTTTTTCTTTGCAGAAACTACCTCTCCCCCGCCGACTGTGCCGCTTGCTTCGACGTCGCCGCCACACAGATTCGCAACTGCTCTGCCGGAGCCAACGGTGCCCGCATCGTCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGCAGTTTCTATGATCAGACAACACAACCTGGGAATGGCATGGCTTGTGGGAAGCAAACATCAGGAGATAAGACAACATTTGACTCAACAGTTGAAAAAGTGCTAATGAATCTCCAAACAGCAACACCCAGAATTCCTGGTTTCTTTGCAGCCACAAAGACTCAAGTACCTAACAATGGTCCTACTATTTATGCCGTTGCTCAATGTGTTGATTCTGTCACAGAGAGTGGCTGCCTTGATTGCTTGAAGGTTGGAAACAACAATCTGCAGATGTGCCTTCCCACATTGGAGGGTAGGGCTTTTGATGCTGGCTGCTTCATGAGATACTCCACCTCTTCCTTCTTTCCTGATAACCAGACCATTGGTGATTTCACACCCTTCTTGACACAAGGTTCAAGCAAGAAGAGAGCTATTATTGGTGGGGTTGTAGGAGGTGTAGCTTTTCTTTTGATAGTTCTTGCAGTGTTTCTTTTGATTAAACAATCAATGAGACCAAAGACAAAGAGGGTTCCCAGAGGTGACATATTAGGAGCAACGGAGCTGAAAGGCCCAGTTAATTACAGGTATAAGGATTTGAAGATTGCAACAAAAAATTTCAGTGAACAAAATAAATTAGGAGAAGGAGGATTTGGTGATGTTTACAAGGGCACTCTAAAGAATGGGAAAATAGTTGCTGTCAAGAGATTAGCTTTAGGCAACCATAAGAGGATAGGGGAAGATTTTGAAAGTGAAGTGAAGCTCATAAGTAATGTTCATCATCGAAATCTTGTTCGGCTTTTGGGATGTTGCAGTAACGGCCAAGAGAAAATCCTTGTTTATGAATACATGAAGAACAACAGTCTTGACAAATTCTTATTTGGTCAAAACAAAGGTTCTCTCAACTGGAAACAACGATATGAAATAATTTTAGGCACGGCAAAAGGTTTGGCCTATTTACATGAGGAATTTTATGTATGTATCATACATAGAGATATAAAGAGTAACAACATCCTCTTAGATGATCACCTTCAGCCTAGAATTTCTGATTTTGGATTGGCAAGACTTCTACCAACAGACCAGTCTCATCTTAGCACAAAATTTGCAGGAACATTAGGATACACTGCACCTGAATATGCAATTCACGGCCAATTATCAGAAAAGGTTGATACCTATAGTTATGGAGTTGTAGTTCTAGAAATCATCAGTGGCCAAAAAAGCAGTGAATTAAAGGTTGATCCTGATGTTGAAGGCGAATTCCTACTGCAACAAGCTTGGAAACTATATGAGAAAGGCATGCACTTAAAGTTGGTGGACAATACCTTAGACCCTAATGACTATGATCCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGTACCCAAGCATCTCCTGTAATAAGGCCAACAATGTCTGAAGTTGTTCTCCTGCTTAAAAGCAAGGGCTTATTGGAGCACATGAAACCCACCATGCCTATCTTTGTTGAAACTAATTTGAGGTCTAGAGAAGGCACCTTCACGTCAGCTTCGTTCCTTCAATCTAATGCTACAGCCTCCACTATTACCCTATCAGGCAGATGA 1965 0.4326 MLQRDRSLLPVATFIFWSCFCCSFDGVVSDPQTLFLNRGCSQYNVSNLASFNDNLNATFRGLRDKVARQRAFFATVKQAHGASPVYALFLCRNYLSPADCAACFDVAATQIRNCSAGANGARIVYDGCFLRYESSSFYDQTTQPGNGMACGKQTSGDKTTFDSTVEKVLMNLQTATPRIPGFFAATKTQVPNNGPTIYAVAQCVDSVTESGCLDCLKVGNNNLQMCLPTLEGRAFDAGCFMRYSTSSFFPDNQTIGDFTPFLTQGSSKKRAIIGGVVGGVAFLLIVLAVFLLIKQSMRPKTKRVPRGDILGATELKGPVNYRYKDLKIATKNFSEQNKLGEGGFGDVYKGTLKNGKIVAVKRLALGNHKRIGEDFESEVKLISNVHHRNLVRLLGCCSNGQEKILVYEYMKNNSLDKFLFGQNKGSLNWKQRYEIILGTAKGLAYLHEEFYVCIIHRDIKSNNILLDDHLQPRISDFGLARLLPTDQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDTYSYGVVVLEIISGQKSSELKVDPDVEGEFLLQQAWKLYEKGMHLKLVDNTLDPNDYDPEEVKKIIEIGLLCTQASPVIRPTMSEVVLLLKSKGLLEHMKPTMPIFVETNLRSREGTFTSASFLQSNATASTITLSGR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2178 654 Gene3D Transferase(Phosphotransferase) domain 1 410 616 - -
Prci2g2178 654 CDD STKc_IRAK 339 607 - -
Prci2g2178 654 FunFam Cysteine-rich receptor-like protein kinase 2 299 409 - -
Prci2g2178 654 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Prci2g2178 654 Gene3D - 147 248 IPR038408 -
Prci2g2178 654 Gene3D - 32 137 IPR038408 -
Prci2g2178 654 Pfam Protein tyrosine and serine/threonine kinase 336 604 IPR001245 GO:0004672|GO:0006468
Prci2g2178 654 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Prci2g2178 654 Gene3D Phosphorylase Kinase; domain 1 301 409 - -
Prci2g2178 654 SMART serkin_6 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2178 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Prci2g2178 654 SUPERFAMILY Protein kinase-like (PK-like) 317 621 IPR011009 -
Prci2g2178 654 ProSiteProfiles Protein kinase domain profile. 333 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2178 654 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Prci2g2178 654 FunFam Cysteine-rich receptor-like protein kinase 2 410 614 - -
Prci2g2178 654 CDD TM_EGFR-like 271 296 - -
Prci2g2178 654 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Prci2g2178 654 Pfam Salt stress response/antifungal 43 134 IPR002902 -
Prci2g2178 654 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Prci2g2178 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 636 - -
Prci2g2178 654 FunFam Cysteine-rich receptor-like protein kinase 2 32 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2178 Prci-Chr2 16818574 16825078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2178 23 654 Receptor kinase-like Gene Family AT1G70520 37.246 2.29e-131 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2178 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2178 - - gmx:100813585 889.412