Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2176 ATGCTTCCACCTAATTCATCCCTTCCTTTAATCACCTTCATATTCTGGTCATGGTGGACGCTTAACGGCGTCGTTTCCGACCGCCAGATCAATCTTCTAAGCCAAGGCTGCACCCCTTCCAACTACTTTTTCGTCTTGTCCAACTTCTCCATCTTCAGCGACAACGTCAACAAAACGTTTCGCGAGATCAGAGAGCAGCTCGTCAATAATCAAAACAAGCACTTCGTGACGGCGATGCGAGTCAACGCAGAAAACCCAGTTTTCAGTCTTTTTCAATGCAGAAACTACCTCTCCATTCATGACTGTGTTGCCTGCTTCGACGCCGCCGCCAAACAGATCCGCGACTGCCGTGCCGGAGCACATGGTGGCCGTGTCATCTACGACGGCTGCTTCCTCAGGTACGAGACCAATGCTTTCTTTGACGAGACAACAGAGAATTTCAATGCCGTGTCGTGTGGTAATCAATCTACAAGAGAATCCACAGAATTTACCTCACTTGTGCAGCAAGTTCTAATGAATCTGCAAACGACAACACCAAAAAAACAAGGGTTTTTTGCAGCCACAAAAGCACAATTGCCTGAGAATGGTTCAACTATTTATGCTTTTGCTCAATGTACTGAAACTATCACACAGGATGGGTGCCTCAATTGCTTGAACACTGGGTACAACAATATGCTTGCTTGTTTTCCCAATTCTGATGGTAAGGCTTATGCTGCTGGGTGCTTCATGAGATACTCCAACACTTCATTCTTCCCTGATAATTACCAGACCATTGATGTCACTCCCTTAATAGACAAGCAAGGTTCAAGCAAGAAAGTGGACATTATTGGTGGAGTAGTTGGAAGTGTAGCTTGTTTTTTAATCCTCTTTGTATTATTTGCCTGGAGGATTAGACGACCAAACACTCCTAAGAAAGTTCCCAGAGGAGAGATAGTTGGAGCAAACAAGTTAGGCGGCCTAGTTACTTACACTTACAGGGATTTGAAGTTTGCAACCAATGATTTTGATGAAAAAAATAAACTTGGACAAGGAGGGTTTGGTGTTGTATACAAGGGCACTCTTAAAAATGGGAAAGTAGTTGCAATCAAGAAATTAACTTTTCACCAATTCACAAAGATGGAGGAAGATTTTGAAAGTGAAGTGAAGCTGATAAGTAATGTTCATCATCTAAATCTTGTTCGACTTTTAGGATGTTGTAATGAAGGGCAGAACAAACTTCTTGTTTATGAATACATGAAAAACAACAGTCTTGACAAATTCTTATTTGGAATGGCAAGAGGTTTGGCTTATCTACATGAGGAGCTTCATGTTCGTATCATACATAGAGATATAAAGACTCATAACATCCTCTTAGATGATGATCTACAACCTAGAATTGCTGATTTTGGGTTGGCAAGGCTTTTGCCTAAGAACAAATCTCATCTTAGCACAAAATTTACAGGAACATTTCTTGGAAATCATCAGTGGTCAACGAAGCAAGGAATTAACCATCAAAGATGA 1500 0.4147 MLPPNSSLPLITFIFWSWWTLNGVVSDRQINLLSQGCTPSNYFFVLSNFSIFSDNVNKTFREIREQLVNNQNKHFVTAMRVNAENPVFSLFQCRNYLSIHDCVACFDAAAKQIRDCRAGAHGGRVIYDGCFLRYETNAFFDETTENFNAVSCGNQSTRESTEFTSLVQQVLMNLQTTTPKKQGFFAATKAQLPENGSTIYAFAQCTETITQDGCLNCLNTGYNNMLACFPNSDGKAYAAGCFMRYSNTSFFPDNYQTIDVTPLIDKQGSSKKVDIIGGVVGSVACFLILFVLFAWRIRRPNTPKKVPRGEIVGANKLGGLVTYTYRDLKFATNDFDEKNKLGQGGFGVVYKGTLKNGKVVAIKKLTFHQFTKMEEDFESEVKLISNVHHLNLVRLLGCCNEGQNKLLVYEYMKNNSLDKFLFGMARGLAYLHEELHVRIIHRDIKTHNILLDDDLQPRIADFGLARLLPKNKSHLSTKFTGTFLGNHQWSTKQGINHQR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2176 499 CDD TM_EGFR-like 275 299 - -
Prci2g2176 499 ProSiteProfiles Gnk2-homologous domain profile. 30 139 IPR002902 -
Prci2g2176 499 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Prci2g2176 499 Pfam Protein kinase domain 336 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2176 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Prci2g2176 499 SMART serkin_6 335 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2176 499 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 483 - -
Prci2g2176 499 SUPERFAMILY Protein kinase-like (PK-like) 318 483 IPR011009 -
Prci2g2176 499 Gene3D Phosphorylase Kinase; domain 1 310 409 - -
Prci2g2176 499 FunFam Cysteine-rich receptor-like protein kinase 2 304 411 - -
Prci2g2176 499 Pfam Salt stress response/antifungal 152 247 IPR002902 -
Prci2g2176 499 Pfam Salt stress response/antifungal 47 136 IPR002902 -
Prci2g2176 499 Gene3D - 30 139 IPR038408 -
Prci2g2176 499 Gene3D - 144 250 IPR038408 -
Prci2g2176 499 FunFam Os07g0541700 protein 405 482 - -
Prci2g2176 499 Gene3D Transferase(Phosphotransferase) domain 1 410 486 - -
Prci2g2176 499 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Prci2g2176 499 ProSiteProfiles Protein kinase domain profile. 335 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2176 499 FunFam Cysteine-rich receptor-like protein kinase 2 147 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2176 Prci-Chr2 16727798 16747930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2176 25 483 Receptor kinase-like Gene Family AT1G70530 34.350 3.31e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2176 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2176 - - pcin:129300003 991.104