Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2174 ATGAATCTGCAGACAACAACACCCAAAAAACAAGGGTTTTTTGCAGCCACAAAGATAGAATTGCCTAATAATGGTACAACTATTTACGCCTTTGCTCAATGCATTGAAACTATCACTCAGAATGGATGCTTCGAATGCTTGAAGACTGGCTATCACAATATGCCAACTTGTCTTCCCAATTCGGATGGCAGGGCTTATGCTGATGGCTGCTTCATCAGATACTCCAACTCTTCCTTCTTTCCTGATAATTACCAGATGATTGAAATCATCACTAATTCTTCTGTAGGCAAACAAGGTTCAAGGAAAAAAGGGGCTGTTATCGGTGGAGTTGTTGGAGGGGTTACTCTTATTTTGATCCTCCTTTTATTATCTACCTGTTTTATTAGACGATCAAAAAGCTCTAAGAGAATTCACAGAGGGGACGTAATTACAGCAACTATGCTGAAAGGCCTAGTTTCTTACTGTTATAAGGATTTGAAGTTTGCAACTCAGAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTTGGTGCCGTATACAAGGGCACTCTAGGAGATGGCAAAGTAGTTGCAGTCAAGAAGTTAACTTTACAACATTCCAGAAAGACGGAGGAAGATTTTTTCAGTGAAGTGATGCTTCTAAGCGACGTTCACCATCCGAATCTCGTTCAACTTTTGGGATGGTGTTGTGAAGGCCATGTCAGAATCCTTGTATATGAATACATGAAAAACAACAGTCTGGACAGATTTTTATTTGGTGAAAGGAAAGGTTATCTCGACTGGAAGCAACGATATGATATAATTTTGGGAATAGCAAGAGGTTTGACTTATCTCCACGAGGAATCTCATCTTCGTATTATACATAGAGATATAAAGACTAATAACATTCTCTTAGATGACGATCTACAATCTAGAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGAAGACAAATCTCATCTTAGTACAAAATTTACAGGAACATTGGGGTACACAGCACCAGAGTATATAATCCATGGTCAATTATCAGAGAAGGCCGATGTCTATAGCTATGGTATTGTAGTCCTTGAAATTATTAGTGGCCAAAAAAGCAAAGCATTAGAGGATGATGGCGACAATGAAAACGAGTTCCTCCCTCTAAATGCTTGGAAACTATATGAGAGAGGCATGCACTTGGATTTGGTGGACAAAACCTTAGACCCAAATGACTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGCTTTGCTTTGCACCCAAGGATTTGCTGACTTAAGGCCAACAATGTCTGAAATAATTGGTTTGCTCCAAAGCAAGGGCTTGCTAGAGCATATGATTCCCACTATGCCTGTCTTAATTGTAACTAATTAG 1380 0.3891 MNLQTTTPKKQGFFAATKIELPNNGTTIYAFAQCIETITQNGCFECLKTGYHNMPTCLPNSDGRAYADGCFIRYSNSSFFPDNYQMIEIITNSSVGKQGSRKKGAVIGGVVGGVTLILILLLLSTCFIRRSKSSKRIHRGDVITATMLKGLVSYCYKDLKFATQNFSEETKLGEGGFGAVYKGTLGDGKVVAVKKLTLQHSRKTEEDFFSEVMLLSDVHHPNLVQLLGWCCEGHVRILVYEYMKNNSLDRFLFGERKGYLDWKQRYDIILGIARGLTYLHEESHLRIIHRDIKTNNILLDDDLQSRIADFGLARLLPEDKSHLSTKFTGTLGYTAPEYIIHGQLSEKADVYSYGIVVLEIISGQKSKALEDDGDNENEFLPLNAWKLYERGMHLDLVDKTLDPNDYDAEEVKKIIEIALLCTQGFADLRPTMSEIIGLLQSKGLLEHMIPTMPVLIVTN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2174 459 CDD STKc_IRAK 172 440 - -
Prci2g2174 459 SMART serkin_6 166 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2174 459 FunFam receptor-like serine/threonine-protein kinase NCRK 142 242 - -
Prci2g2174 459 Pfam Salt stress response/antifungal 12 76 IPR002902 -
Prci2g2174 459 SUPERFAMILY Protein kinase-like (PK-like) 146 439 IPR011009 -
Prci2g2174 459 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 453 - -
Prci2g2174 459 ProSiteProfiles Gnk2-homologous domain profile. 1 79 IPR002902 -
Prci2g2174 459 Pfam Protein kinase domain 167 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2174 459 Gene3D Phosphorylase Kinase; domain 1 140 242 - -
Prci2g2174 459 ProSitePatterns Protein kinases ATP-binding region signature. 172 195 IPR017441 GO:0005524
Prci2g2174 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Prci2g2174 459 Gene3D Transferase(Phosphotransferase) domain 1 243 446 - -
Prci2g2174 459 FunFam Cysteine-rich receptor-like protein kinase 2 243 447 - -
Prci2g2174 459 Gene3D - 1 79 IPR038408 -
Prci2g2174 459 ProSiteProfiles Protein kinase domain profile. 166 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2174 Prci-Chr2 16720430 16723638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2174 29 80 Receptor kinase-like Gene Family AT1G70520 38.462 7.74e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2174 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2174 - - pcin:129300016 887.486