Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2171 ATGCTCCAATCTACTAATCTCCTTCCCTTATTCTTCTTCTTCGTGTGCTGGTCATGCGGGACTCTAAACGTCGTGGTTTCGGAGCCACAGACCAATCTTCTGTACACTGCGTGCAGCCCATACTACGAATTCGTGATCTCCAACTTCAGCATCTTCAGTGAGAACCTAAACGCAACGTTTCGAGACCTGAGAGAGCAGGTGAAGGACCAAAACAAGCACTTCGCTACGTCGCAGGTAGGAGACCAGAACAACCCAGCTTCCTCTCTTTTCCAATGCAGAGACTACCTCTCCATCGCCGACTGCGTCGCCTGCTTCGACGTTGCTGCCGTTCAGATCCGCAACTGCTCCGCTGGGACTCATGGTGCTCGCGTCGTCTACGACGGCTGCTTTCTCAGGTACGAGGTCAGCACTTTCTTCAGTGAGACAACCTCATTCAATGCTGTATCGTGCGGGAATCGTAGTGCAGGAGATCAAGCCACAGAATTCACGTCAGCTACCCAAAAATTGCTAACGAATCTGCAAGCGACAACGCCCACAATCACTGGCTTTTATGCAGCTAGCAAGACCCAAGTGCCTAATAATGGTGGAACTATATATGCCTTCGCTCAATGTATTGAAACTATCACACAAAGTGCTTGCCTGGATTGCCTCAACTCTGGATATAGCAATATGCAGACTTGTCTTCCCAATTCAGATGGCAGGGCTTATGCTGCTGGCTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAAACCATTGATACTATTCCCTTGGTCAAACAAGGTCGTAGTAGCAATAATAAGGGGGCTATTATTGGTGGTGTGCTTGGAGCTGTGGTTGTTGTTTTGGTGGTCCTTGCATTACTTGTTTGGATCAAACGACCAAAAAAGCCAAAAAGTGTTCCTAGAGATGACATACCTGGAGCAAGCAAGTTGAAACCACCAGTAACTTACAATTATAGGGACTTGAAGCTTGCAACAAAAAATTTTAGTGTAGAAAATAAACTAGGAGCGGGAGGGTTTGGTACTGTATACAAGGGTAACTTGAAGAACGGGAAAGTAGTGGCGATCAAAAAATTAACTTTACGAAACTCCCAAAAAATGGAGGAAGAGTTTGAGAGCGAAGTGAAGCTGATAAGTAATGTTCATCATCGAAATCTTATTCGACTTCTGGGATGCTCTAGTAAAGGAGATCAAAGAATCCTTGTTTATGAATACATGAAAAACACCAGCCTTGATCGATTCTTATTTGGTAAAAGGAGAGGTTTTCTCGATTGGAAGCAGAGATTTGATATTATTTTAGGAACAGCAAGGGGATTAGCCTACTTACATGAAGAATTTCATGTTCGTATAATACATAGAGATATAAAGACCAACAACATCCTTTTAGATGATGATCTTCAGCCCAAAATTGCTGATTTTGGATTGGCAAGACTCATACCTGAAGACAAATCTCATCTTAATACAAAATTTGTTGGAACATTGGGGTACACAGCACCTGAATATGCAATTCATGGCCAATTATCGCAGAAAGCTGATGTTTTCAGCTATGGCGTTGTAGTCTTGGAAATCATCAGTGGTCAAAGAAGTGAAGAATTGAAGGTCCATGGTGAAGTTGAAGGCGAATTCCTCCTTCAAAAAGCTTGGAAATTATATGAGAGAGGAATCCACTTAGAGTTGGTGGACAATACCTTAGACCTTAATGAGGATGATGCAGAAGAAGTGAAGAAAGTCATGGAGATTGGTTTGCTTTGCACTCAAGCATTTGCTGACATAAGGCCAACAATGTCAGAAGTAGTTGTTTTTCTCCAAAACAAGGCCTTATCAGAGAACTTAAAACCCACCATGCCTCTCTTGATTCAAACTAATTAA 1881 0.429 MLQSTNLLPLFFFFVCWSCGTLNVVVSEPQTNLLYTACSPYYEFVISNFSIFSENLNATFRDLREQVKDQNKHFATSQVGDQNNPASSLFQCRDYLSIADCVACFDVAAVQIRNCSAGTHGARVVYDGCFLRYEVSTFFSETTSFNAVSCGNRSAGDQATEFTSATQKLLTNLQATTPTITGFYAASKTQVPNNGGTIYAFAQCIETITQSACLDCLNSGYSNMQTCLPNSDGRAYAAGCFMRYSTTSFFPDNQTIDTIPLVKQGRSSNNKGAIIGGVLGAVVVVLVVLALLVWIKRPKKPKSVPRDDIPGASKLKPPVTYNYRDLKLATKNFSVENKLGAGGFGTVYKGNLKNGKVVAIKKLTLRNSQKMEEEFESEVKLISNVHHRNLIRLLGCSSKGDQRILVYEYMKNTSLDRFLFGKRRGFLDWKQRFDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLIPEDKSHLNTKFVGTLGYTAPEYAIHGQLSQKADVFSYGVVVLEIISGQRSEELKVHGEVEGEFLLQKAWKLYERGIHLELVDNTLDLNEDDAEEVKKVMEIGLLCTQAFADIRPTMSEVVVFLQNKALSENLKPTMPLLIQTN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2171 626 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Prci2g2171 626 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2171 626 FunFam Cysteine-rich receptor-like protein kinase 2 301 409 - -
Prci2g2171 626 FunFam Cysteine-rich receptor-like protein kinase 2 410 614 - -
Prci2g2171 626 FunFam Cysteine-rich receptor-like protein kinase 2 145 249 - -
Prci2g2171 626 SUPERFAMILY Protein kinase-like (PK-like) 317 616 IPR011009 -
Prci2g2171 626 Coils Coil 53 73 - -
Prci2g2171 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Prci2g2171 626 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Prci2g2171 626 Gene3D - 31 138 IPR038408 -
Prci2g2171 626 Gene3D - 142 249 IPR038408 -
Prci2g2171 626 CDD STKc_IRAK 339 603 - -
Prci2g2171 626 Pfam Protein kinase domain 334 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2171 626 ProSiteProfiles Gnk2-homologous domain profile. 143 249 IPR002902 -
Prci2g2171 626 Pfam Salt stress response/antifungal 150 246 IPR002902 -
Prci2g2171 626 Pfam Salt stress response/antifungal 48 134 IPR002902 -
Prci2g2171 626 ProSiteProfiles Protein kinase domain profile. 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2171 626 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 623 - -
Prci2g2171 626 SMART serkin_6 333 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2171 626 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2171 Prci-Chr2 16667121 16672357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2171 3 609 Receptor kinase-like Gene Family AT1G70520 37.903 1.37e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2171 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2171 - - pcin:129300003 799.275