Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2170 ATGCTCCAATCTACTAATCTCCTTCCCTTATTCTTCTTCTTCGTGTGCTGGTCATGCGGGACTCTAAACGTCGTGGTTTCGGAGCCACAGACCAATCTTCTGTACACTGCGTGCAGCCCATACTACGAATTCGTGATCTCCAACTTCAGCATCTTCAGTGAGAACCTAAACGCAACGTTTCGAGACCTGAGAGAGCAGGTGAAGGACCAAAACAAGCACTTCGCTACGTCGCAGGTAGGAGACCAGAACAACCCAGCTTCCTCTCTTTTCCAATGCAGAGACTACCTCTCCATCGCCGACTGCGTCGCCTGCTTCGACGTTGCTGCCGTTCAGATCCGCAACTGCTCCGCTGGGACTCATGGTGCTCGCGTCGTCTACGACGGCTGCTTTCTCAGGTACGAGGTCAGCACTTTCTTCAGTGAGACAACCTCATTCAATGCTGTATCGTGCGGGAATCGTAGTGCAGGAGATCAAGCCACAGAATTCACGTCAGCTACCCAAAAATTGCTAACGAATCTGCAAGCGACAACGCCCACAATCACTGGCTTTTATGCAGCTAGCAAGACCCAAGTGCCTAATAATGGTGGAACTATATATGCCTTCGCTCAATGTATTGAAACTATCACACAAAGTGCTTGCCTGGATTGCCTCAACTCTGGATATAGCAATATGCAGACTTGTCTTCCCAATTCAGATGGCAGGGCTTATGCTGCTGGCTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAAACCATTGATACTATTCCCTTGGTCAAACAAGGTCGTAGTAGCAATAATAAGGGGGCTATTATTGGTGGTGTGCTTGGAGCTGTGGTTGTTGTTTTGGTGGTCCTTGCATTACTTGTTTGGATCAAACGACCAAAAAAGCCAAAAAGTGTTCCTAGAGATGACATACCTGGAGCAAGCAAGTTGAAACCACCAGTAACTTACAATTATAGGGACTTGAAGCTTGCAACAAAAAATTTTAGTGTAGAAAATAAACTAGGAGCGGGAGGGTTTGGTACTGTATACAAGGGTAACTTGAAGAACGGGAAAGTAGTGGCGATCAAAAAATTAACTTTACGAAACTCCCAAAAAATGGAGGAAGAGTTTGAGAGCGAAGTGAAGCTGATAAGTAATGTTCATCATCGAAATCTTATTCGACTTCTGGGATGCTCTAGTAAAGGAGATCAAAGAATCCTTGTTTATGAATACATGAAAAACACCAGCCTTGATCGATTCTTATTTGGTAAAAGGAGAGGTTTTCTCGATTGGAAGCAGAGATTTGATATTATTTTAGGAACAGCAAGGGGATTAGCCTACTTACATGAAGAATTTCATGTTCGTATAATACATAGAGATATAAAGACCAACAACATCCTTTTAGATGATGATCTTCAGCCCAAAATTGCTGATTTTGGATTGGCAAGACTCATACCTGAAGACAAATCTCATCTTAATACAAAATTTGTTGGAACATTGGGGTACACAGCACCTGAATATGCAATTCATGGCCAATTATCGCAGAAAGCTGATGTTTTCAGCTATGGCGTTGTAGTCTTGGAAATCATCAGTGGTCAAAGAAGTGAAGAATTGAAGGTCCATGGTGAAGTTGAAGGCTTGGAAATTATATGA 1647 0.4335 MLQSTNLLPLFFFFVCWSCGTLNVVVSEPQTNLLYTACSPYYEFVISNFSIFSENLNATFRDLREQVKDQNKHFATSQVGDQNNPASSLFQCRDYLSIADCVACFDVAAVQIRNCSAGTHGARVVYDGCFLRYEVSTFFSETTSFNAVSCGNRSAGDQATEFTSATQKLLTNLQATTPTITGFYAASKTQVPNNGGTIYAFAQCIETITQSACLDCLNSGYSNMQTCLPNSDGRAYAAGCFMRYSTTSFFPDNQTIDTIPLVKQGRSSNNKGAIIGGVLGAVVVVLVVLALLVWIKRPKKPKSVPRDDIPGASKLKPPVTYNYRDLKLATKNFSVENKLGAGGFGTVYKGNLKNGKVVAIKKLTLRNSQKMEEEFESEVKLISNVHHRNLIRLLGCSSKGDQRILVYEYMKNTSLDRFLFGKRRGFLDWKQRFDIILGTARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLIPEDKSHLNTKFVGTLGYTAPEYAIHGQLSQKADVFSYGVVVLEIISGQRSEELKVHGEVEGLEII 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2170 548 Pfam Protein kinase domain 334 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2170 548 Pfam Salt stress response/antifungal 48 134 IPR002902 -
Prci2g2170 548 Pfam Salt stress response/antifungal 150 246 IPR002902 -
Prci2g2170 548 Gene3D Transferase(Phosphotransferase) domain 1 410 543 - -
Prci2g2170 548 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Prci2g2170 548 FunFam Cysteine-rich receptor-like protein kinase 2 300 409 - -
Prci2g2170 548 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 410 538 - -
Prci2g2170 548 ProSiteProfiles Protein kinase domain profile. 333 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2170 548 SUPERFAMILY Protein kinase-like (PK-like) 314 532 IPR011009 -
Prci2g2170 548 SMART serkin_6 333 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2170 548 Coils Coil 53 73 - -
Prci2g2170 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Prci2g2170 548 Gene3D - 142 249 IPR038408 -
Prci2g2170 548 Gene3D - 31 138 IPR038408 -
Prci2g2170 548 FunFam Cysteine-rich receptor-like protein kinase 2 145 249 - -
Prci2g2170 548 CDD STKc_IRAK 339 548 - -
Prci2g2170 548 ProSiteProfiles Gnk2-homologous domain profile. 143 249 IPR002902 -
Prci2g2170 548 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 534 - -
Prci2g2170 548 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Prci2g2170 548 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2170 Prci-Chr2 16667120 16672038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2170 3 538 Receptor kinase-like Gene Family AT1G70520 38.603 4.06e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g2170 Pkinase 3.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2170 - - gmx:100811953 680.633