Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2134 ATGGTGTCTGCAGCTATCGCCATTCATGATCAAAATGGAGTTACCAGATCTCGGGGTAGTATTCCAGTAGGAAATGGAGTATCTTTGAGCTCTGGACTACATTCTGTTGCACGGATTCATCTAAATAATCAGTTTTCTTGTGGGAATGACTGTGCTCCAAAGGTAAGGAAACCGTATACTATCAGGAAACAAAGAGAGAGATGGACAGATGAAGAGCATCTGAAGTTTCTTGAAGCTTTAAAGATGTATGGTCGGGCTTGGCGAAAGATTGAAGAACATGTTGGCACAAAAACTACAGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGTGATCCTTGTGGGAGCAGCACAAGCTCGATGGAGCCCATTGAAATTCCACCCCCACGACCAAAACGAAAGCCAATGCATCCTTACCCTCGTAAACTGGTGGAGCTCCCTAACAAAGAAGCTTCCAAACCAAAACAGCTGATTATGTCTAATCCTCTGAAATCATCAGATTTTAACCAGGAAAACCAATCCCCCAAGTCAGTGTTATCGGCAGTTGGTTCAGACACCCTTGGTTCCTCTGATTCAGACACACCAAATGGAAGCTCATCCCCAATTTCATCAATTAGTGCTGTTCATGCTAACAACTTTGTAGTTGCTGAACCTGAAATCCTACAATTAGAGGAGGATGGGTGTCCACCATCAGCTGGACTAAATGATGATTCAACTCTTGATGAGCTACCAAATAAGAAAGAAGGAATCTCTGCCAAAGAAGGTACAACAGAAGAATCATCTGCTCGGGTTCTGAAGCTTTTTGGGACAACTTTGTTAGTAACTGATAACCGCGGGACATCCTCTCAAACAATGGAAACATGCAAGTTGATTCACTCAAACTTCTTGCCAGTGAAATCTTCTGGCCCAGATGTGGAATGTGATATTAATACTTTACCTAATGGAACACATGGTGTTGTTTATAACATGCAGCTTCAGAGTGGAAATTCAGGGCTTGCAGAGTGTCCTTCTGCTTCTTTTGTTCCTTGTTGGAATCTTCCTCACATAAGGTTGCTGCACAAGAAGCAGCCTGAAGGAAAACAACTAGACTCCAATCTTACGGAAATGGAACGGGTAGAAGTTAAGAATGAAGGATCTTTGACTAACTCAAACACTAGCTCTTCTGTAAATGAGGGTAAACAATCAGATATGCAAGCCAAAAGAGATACTTCAGCTATATTTGATTTTGGTGGGAGACAGACGAACTGGGGGAAAGGGTTTGTGCCATATAAGAGGTGCATTGCAGAGAGGGAAAGCCAGGCCTCATCAGTGACATAA 1329 0.4251 MVSAAIAIHDQNGVTRSRGSIPVGNGVSLSSGLHSVARIHLNNQFSCGNDCAPKVRKPYTIRKQRERWTDEEHLKFLEALKMYGRAWRKIEEHVGTKTTVQIRSHAQKFFSKVLRDPCGSSTSSMEPIEIPPPRPKRKPMHPYPRKLVELPNKEASKPKQLIMSNPLKSSDFNQENQSPKSVLSAVGSDTLGSSDSDTPNGSSSPISSISAVHANNFVVAEPEILQLEEDGCPPSAGLNDDSTLDELPNKKEGISAKEGTTEESSARVLKLFGTTLLVTDNRGTSSQTMETCKLIHSNFLPVKSSGPDVECDINTLPNGTHGVVYNMQLQSGNSGLAECPSASFVPCWNLPHIRLLHKKQPEGKQLDSNLTEMERVEVKNEGSLTNSNTSSSVNEGKQSDMQAKRDTSAIFDFGGRQTNWGKGFVPYKRCIAERESQASSVT 442
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2134 442 FunFam protein REVEILLE 6 isoform X1 67 115 - -
Prci2g2134 442 SMART sant 64 112 IPR001005 -
Prci2g2134 442 MobiDBLite consensus disorder prediction 131 153 - -
Prci2g2134 442 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Prci2g2134 442 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Prci2g2134 442 MobiDBLite consensus disorder prediction 229 262 - -
Prci2g2134 442 MobiDBLite consensus disorder prediction 158 207 - -
Prci2g2134 442 MobiDBLite consensus disorder prediction 377 404 - -
Prci2g2134 442 Gene3D - 67 113 - -
Prci2g2134 442 CDD SANT 67 110 IPR001005 -
Prci2g2134 442 MobiDBLite consensus disorder prediction 244 258 - -
Prci2g2134 442 MobiDBLite consensus disorder prediction 380 398 - -
Prci2g2134 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Prci2g2134 442 MobiDBLite consensus disorder prediction 116 207 - -
Prci2g2134 442 SUPERFAMILY Homeodomain-like 59 112 IPR009057 -
Prci2g2134 442 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Prci2g2134 442 ProSiteProfiles SANT domain profile. 63 114 IPR017884 -
Prci2g2134 442 PANTHER SWI/SNF COMPLEX-RELATED 48 381 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci2g2134 Prci-Chr2 16251476 16255237 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g2134 Myb_DNA-binding 2.2e-13 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2134 - - pcin:129303890 833.172