Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2121 ATGGTTCTCTCTAAAACCTCCTCTCAGACCGACGTCTCCGTTCACTCTACCTTCGCTTCCCGTTATGTCCGCGCTTCTCTTCCCAGGTTCAAGATGCCGGAGGAGTCGATTCCGAAGGAGGCGGCGTTTCAGATTATAAACGACGAGCTCATGCTGGACGGCAATCCGAGGCTGAACCTCGCCTCCTTCGTCACCACGTGGATGGAACCTGAGTGCGATAAGCTCATCATGGCCGCCATTAACAAGAACTACGTCGACATGGATGAGTACCCTGTCACTACCGAACTCCAGAATCGGTGCGTGAACATGATAGCTCATCTTTTCAACGCACCTCTCGGAGATTCAGAGGCCGCCGTCGGTGTTGGCACCGTTGGTTCATCAGAGGCCATAATGTTGGCCGGTTTGGCCTTCAAAAGAAAATGGCAGAACAAAAGAAAGGCCGAGGGAAAGCCTTATGACAAACCCAACATTGTCACAGGAGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCTAGGTACTTCGAAGTGGAGCTGAAAGAGGTGAAACTGAGGGAAGGGTATTACGTAATGGACCCTGAGAAAGCAGTGGAGATGGTGGACGAGAACACCATCTGTGTTGCTGCAATCCTCGGCTCCACACTGAATGGAGAGTTCGAAGATGTCAAGCTCTTGAACGATCTCCTTACAAAAAAGAACAGTGAAACTGGATGGGATACGCCAATTCATGTGGATGCAGCGAGTGGTGGTTTCATTGCACCATTCATATACCCAGAACTTGAGTGGGACTTCAGGTTGCCTCTAGTGAAGAGCATCAATGTGAGTGGGCATAAGTATGGTTTGGTCTACGCCGGTATTGGGTGGGTCATCTGGAGAAGCAAAGAAGACTTGCCTGAGGAGCTCATCTTCCACATCAACTATCTCGGTGCCGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCAAGTCAAGTCATTGCTCAGTACTACCAACTCATTCGCTTGGGTTACGAGGGATACAGGAACGTGATGGAGAATTGCAGAGACAACATGCTGGTGCTAAAAGAAGGACTTGAGAAGACAGGGAGGTTCACCATCGTTTCAAAGGACGATGGTGTTCCATTGGTGGCTTTCTCTCTCAAGGACAAAAGCCAATTCAACGAGTTCCAGGTTTCCGACCTGCTGCGGAGGTTCGGCTGGATCGTGCCGGCCTATACCATGCCTCCCGACGCCCAGCACGTGACCGTGCTCCGCGTCGTCATCCGCGAGGACTTCTCCAGAACCCTCGCCGAGCGTCTCGTGCTGGACGTCCAGAAGGTCCTGCACGAGCTGGAGTTGCTTCCTCCCAAGGCGGTGTCCACCACCACCGTCACGGTGGCCGAGCATCATGAGGAGGTCGTGAACAATGGCAGCGTCGTGGTCACCAAGAAGAGTGAGTTGGAGACGCAGAGGGAGATCACTGATGTTTGGAAGAAGTTCGTGCTGATGAGGAAGAAGAACAATGAAAAGATGAGTGGCGTTTGCTAA 1527 0.5174 MVLSKTSSQTDVSVHSTFASRYVRASLPRFKMPEESIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTKKNSETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMLVLKEGLEKTGRFTIVSKDDGVPLVAFSLKDKSQFNEFQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVQKVLHELELLPPKAVSTTTVTVAEHHEEVVNNGSVVVTKKSELETQREITDVWKKFVLMRKKNNEKMSGVC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2121 508 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Prci2g2121 508 Gene3D - 66 360 IPR015421 GO:0003824
Prci2g2121 508 CDD DOPA_deC_like 59 439 - -
Prci2g2121 508 Gene3D - 361 448 - -
Prci2g2121 508 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
Prci2g2121 508 FunFam Glutamate decarboxylase 361 448 - -
Prci2g2121 508 FunFam Glutamate decarboxylase 66 360 - -
Prci2g2121 508 FunFam Glutamate decarboxylase 1 65 - -
Prci2g2121 508 NCBIfam glutamate decarboxylase 16 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Prci2g2121 508 Gene3D - 1 65 - -
Prci2g2121 508 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2121 Prci-Chr2 16157758 16164715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2121 1 508 Calmodulin-binding Proteins AT5G17330 82.480 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2121 K01580 - gmx:100796533 904.049