Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2104 ATGCCCATGGAAGCAGGGATTTTCATTGAGCCACCTGCTTCTTCTTCTTCGTCAACCTCAACTCATCATCATCCTCCTGATCTTTCTCTTCACATCAGCCTTCCTTCTTCAACCTCTTCTTCTTTGATTTGCAGCAACATCAACTATGAACCACATCGGCATCACTACAGTGCTAATTCTTCTTCTTCAACCTCTAATTTCTCTTCTTTACTTTCTGTCTCTCACTCTCATGCCCACACTGAGCTGTCGCTCGGAACCAATTTCACTTCTGCAACACAAGAACCAGCACCAGCACAACACTACAGCAGAAACAGCAACAATAGTAATCATAATAATCATAACCCTTATTTTCAGACCCCCCAGTATTTCCTCCACCACCACCAGAATCCTAATAGTGTCAATAACTATGGCGTCTCATTGATTGATGTGTCTCATCCTCCTTCTTCCGACGGTTTGAGACCCATCAAGGGGATTCCGGTGTATCACAACCGTTCCTTCCCTTTCTTGCCGGTGGACCACAACCACAAGGATCATCATCGGCAGCAAACCAAGATGTGTTTCTATAATCCTTCTTTCCCTTCTTCTTCTCCTCCTCCTTCGGCTTCTCCGTACTTGGCGGTGGCTGCCGGGGGGTTGGATCCTGTGTCGGCGGCGTATAGGGCGGGGGCCACCGGCAGGTTTAATGGGATTTCTGGAGACGCTTTCAAATCTCATCATCATCAATTGCACCACCACCACCACCACCACCAGTATGGGATGGTTGGGCCATCTTCACATGACGCGTCTCCGAGCAGTGGACTCATGAGATCCAGATTCTTGCCTAAGCTTCCCACAAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACTACCCTCCATGCTCGTTTCGTTCACGCCGTCGAGCTCCTCGGCGGTCATGAAAGAGCGACTCCGAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTTACATTAGCTCATGTGAAAAGCCACTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGCCATTCAGATGGGTCTGGAGAAGACGACATATTTGCAGATCAAAGAGGAAGCAGAACAGATCGGTCAGTTCAGCAAGATATGGATTACTCCTCTACTACCACTACTCTATGGAGCAATTCTTCAAGTATTAGAGAGCCATGGCTTCAAAATAGTACCCAAGACATTGACAGTCTGAGACCTACGTTGCAGACACAGCCACTATCATCAGCAGGGCATCAAATTCAGGAGTGTGATTCTAGGCATGTGAAGAACAACATATCAAGCTCTAATTTGGAGTGCAAGAACCCAAGTTTAGAGTTTACATTAGGAAGACCAGATTGGAATGGCAAATGA 1383 0.4722 MPMEAGIFIEPPASSSSSTSTHHHPPDLSLHISLPSSTSSSLICSNINYEPHRHHYSANSSSSTSNFSSLLSVSHSHAHTELSLGTNFTSATQEPAPAQHYSRNSNNSNHNNHNPYFQTPQYFLHHHQNPNSVNNYGVSLIDVSHPPSSDGLRPIKGIPVYHNRSFPFLPVDHNHKDHHRQQTKMCFYNPSFPSSSPPPSASPYLAVAAGGLDPVSAAYRAGATGRFNGISGDAFKSHHHQLHHHHHHHQYGMVGPSSHDASPSSGLMRSRFLPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDIFADQRGSRTDRSVQQDMDYSSTTTTLWSNSSSIREPWLQNSTQDIDSLRPTLQTQPLSSAGHQIQECDSRHVKNNISSSNLECKNPSLEFTLGRPDWNGK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2104 460 FunFam Myb family transcription factor 283 341 - -
Prci2g2104 460 MobiDBLite consensus disorder prediction 1 32 - -
Prci2g2104 460 Pfam Myb-like DNA-binding domain 286 337 IPR001005 -
Prci2g2104 460 MobiDBLite consensus disorder prediction 92 117 - -
Prci2g2104 460 MobiDBLite consensus disorder prediction 356 372 - -
Prci2g2104 460 SUPERFAMILY Homeodomain-like 282 338 IPR009057 -
Prci2g2104 460 MobiDBLite consensus disorder prediction 11 32 - -
Prci2g2104 460 MobiDBLite consensus disorder prediction 340 385 - -
Prci2g2104 460 MobiDBLite consensus disorder prediction 239 270 - -
Prci2g2104 460 MobiDBLite consensus disorder prediction 437 460 - -
Prci2g2104 460 Gene3D - 284 341 - -
Prci2g2104 460 NCBIfam myb-like DNA-binding domain, SHAQKYF class 285 338 IPR006447 GO:0003677
Prci2g2104 460 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 26 459 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2104 Prci-Chr2 16017939 16024658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2104 153 460 G2-like Transcription Factor Family AT5G16560 50.149 1.61e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci2g2104 Myb_DNA-binding 2.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2104 - - gmx:100813413 452.981