Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2075 ATGCAGGATTCTTTTCCTTGTGACTTGAAGACTGCAAGATTAATTACCTTCGTTAACCCTTTGTCGGTGCCGTCTTCAAATCTCCACTCTTCAGACTTAAGGATTGCGATATTACTTCCTTCCTTACTTTGTGACTCGAGATTCATTCCTTGCTTCCCAAGATTCGATGGCCGAACTGATTGGAACTCCAGCATGTGTGCAACTGATCTCCAATCACGTTCACTAGTAGTTTGGTCTGATTTCGCTGAAACAAAACTGGACAACCGTGTTCCCAATAAACCTTCTTTGACGACGGTGAAGCTGGAGAAGGCAAAGGGGGATATCAAGTGGAATGAAGCGTCGTCGTCCTCTGATTCTCCTTTTTCTTCTTTTTCATCTTCGTCACCGTCGTCTTCATTGGACGATAGAGAGTATAAGGTGATCAGGGACGCGAATGACCAGTTTAGAGCATCAGGAAGTCGATTCGAATTGTTAAAACACGAATCAGATTTGAGGAATTTCGGTCACCAAACCTTTCTCAATGGCATCAGTGGTTGCTACAAAGACTACGTGATTCACCCCAACAACAGGTGGTATCGGGCATGGACAAAATTCATATTGTTATGGGCAGTGTATTCATCCTTCTTCACCTCGATGGAGTTTGGATTTTTTCGTGGATTGCCTGAGGATCTCCTTATACTGGACATCATTGCACAAATAGCTTTCCTTGTAGACATTGTTTTGCAGTTCTTTGTTGCTTATAGGGACACTCAGACCTATTGTATGGTTTATAAGCGAACCCCTATAGCTTTGCGGTATATAAAATCTAGCTTTGTCATTGATCTTTTAGGATGTTTGCCCTGGGATTTTATTTACAAGGCTTCTGGTAGAAGAGAGGAATTAAGGTACTTTTTGTGGATAAGATCATATCGGGTGCGCAGAGTCAATGATTTTTTACAGCAGTTGGAAAAGGATATACGGGTAAATTACATGTTTACTAGGATTCTGAAACTTCTAGCAGTTGAGCTGTACTGCACTCACATAGCTGCCTGTATCTTCTACTATTTGGCTACCACACTACCTCCTTCCCAAGAGGGCTATACGTGGATTGGAAGTCTAGAGCTGGGCGACTATAGTTATTCACATTTCAGAGATATTGATTTCGGAAAGCGTTACATAACATCCTTATATTTTTCTATTGTTACAATGGCTACTGTTGGGTATGGAGATATACACGCGGTCAATATGAGGGAGATGATATTTGTAATGATATTTGTGTTATTTGACATGGTTCTTGGTGCTTATTTGATTGGTAACATCACGGCATTAATAGTCAAAGGATCAAAGACTGAAAAGTTTAGGGACAAAATGAAGGATCTCACGAAATATATGAACAGAAACCGATTAGGAAGGGACATCCGTGAACAAATAAAAGGCCATGTGTGCTTACAGTATGAGAGTAGATATGCTGAAACAGCTGTCGTTCAAGAATTACCCATTTCTATTCGAGCAAAGATATCACAGACATTATATTTGCCATACATCGAAAAAGTTTCTCTGTTTAAGGGTTGCTCTTCAGAATTTATCAATCAGATTGTTATTCGGCTCTATGAAGAATTCTTTCTCCCAGGAGAAGTGATTGTGGAATATGGAAGTGTTGTGGACCAGCTATACTTTGTCTGTCATGGTGTGCTGGAAGAAGTAGGTACATGTAAAGATGGATATGAAGAGACAGTTTCCCTTCTACAACCTTACAGTGTATTTGGAGAAATATCTGTTCTTTGTAACATTCCTCAGCCATATACTGTTAGGGTTTGTGAACTATGTAGGCTTCTGCGGCTTGATAAACAATCATTCACAAATATTGTTGAAGTATACTTTTATGATGGAAGGAAAGTATTGAACAACCTTCTAGAGGGGAAAGAATCTTTTCATGATAAACAATTGGGGTCAGACATTACTCTTCATATTAGCAAGCAAAAAGCTGAACTTGCTTTAAAGGTCAATAATGCAGCTTTTCAAGGAGATCTGTATCAACTAAAAGGTTTAGTTCGAGCTGGAGCTAATCCCAACAAGACTGATTATGATGGAAGGTCACCCTTGCATCTTGCAGCATCTAGAGGATATGAAGATATCACACATTTCCTTATTCAGGAAAGCGTAGATGTCAGTATTAGAGATAACTTTGGGAATACGCCACTACTTGAGGCTATAAAGAATGGACATGATAGAGTTGCTTCCTTACTTGTTAAAGAAGGGGCGTCAATGAGGATAGACAATCCGGGTAGTTTTCTATGCACAGTTGTTGCAAGGGGTGATTCAGATTATGTTAAAAGGCTATTATCTTACGGTATGGATCCTAACTCAAAAAATTATGATTACCGATCCCCTCTTCATGTTGCCGCTGCTGAAGGTCTATACTTCATGGCAAGGTTGCTATTAGATGCTGGGGCTAGTGTTTTCACCAAAGACAGATGGGGAAATACCCCACTTGATGAAGCCAAGATGAGTGGGAATAAAAATATGATGAAGCTACTAGAAGATGCAAAGTCTGCTCAATTGTTGAAATTCCCAAATCATTCCTCAGAATTTACTAATAAAATGCACCCAATGAAATGCACAATATACCCTTTCCACCCATGGGATCCAAAAGAACTTGGAAGATTTGGAATTGTATTGTGGATTCCACACACCATTGAAGAGCTTATGAAAAGAGCAACAGAGCAGCTAGACTTTTCTTCTGATTCCTGTATTCTGTCTGAAAATGCAGGTTTAATTACTGATGTTGACATGATCAAAGATGGCCAGAAGCTGTATTTAGTCCACAAAACGCAATAG 2817 0.3962 MQDSFPCDLKTARLITFVNPLSVPSSNLHSSDLRIAILLPSLLCDSRFIPCFPRFDGRTDWNSSMCATDLQSRSLVVWSDFAETKLDNRVPNKPSLTTVKLEKAKGDIKWNEASSSSDSPFSSFSSSSPSSSLDDREYKVIRDANDQFRASGSRFELLKHESDLRNFGHQTFLNGISGCYKDYVIHPNNRWYRAWTKFILLWAVYSSFFTSMEFGFFRGLPEDLLILDIIAQIAFLVDIVLQFFVAYRDTQTYCMVYKRTPIALRYIKSSFVIDLLGCLPWDFIYKASGRREELRYFLWIRSYRVRRVNDFLQQLEKDIRVNYMFTRILKLLAVELYCTHIAACIFYYLATTLPPSQEGYTWIGSLELGDYSYSHFRDIDFGKRYITSLYFSIVTMATVGYGDIHAVNMREMIFVMIFVLFDMVLGAYLIGNITALIVKGSKTEKFRDKMKDLTKYMNRNRLGRDIREQIKGHVCLQYESRYAETAVVQELPISIRAKISQTLYLPYIEKVSLFKGCSSEFINQIVIRLYEEFFLPGEVIVEYGSVVDQLYFVCHGVLEEVGTCKDGYEETVSLLQPYSVFGEISVLCNIPQPYTVRVCELCRLLRLDKQSFTNIVEVYFYDGRKVLNNLLEGKESFHDKQLGSDITLHISKQKAELALKVNNAAFQGDLYQLKGLVRAGANPNKTDYDGRSPLHLAASRGYEDITHFLIQESVDVSIRDNFGNTPLLEAIKNGHDRVASLLVKEGASMRIDNPGSFLCTVVARGDSDYVKRLLSYGMDPNSKNYDYRSPLHVAAAEGLYFMARLLLDAGASVFTKDRWGNTPLDEAKMSGNKNMMKLLEDAKSAQLLKFPNHSSEFTNKMHPMKCTIYPFHPWDPKELGRFGIVLWIPHTIEELMKRATEQLDFSSDSCILSENAGLITDVDMIKDGQKLYLVHKTQ 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2075 938 Pfam KHA, dimerisation domain of potassium ion channel 865 933 IPR021789 -
Prci2g2075 938 FunFam Potassium channel KAT2 501 638 - -
Prci2g2075 938 Gene3D Jelly Rolls 497 635 IPR014710 -
Prci2g2075 938 MobiDBLite consensus disorder prediction 111 133 - -
Prci2g2075 938 ProSiteProfiles Ankyrin repeat profile. 722 754 IPR002110 GO:0005515
Prci2g2075 938 Pfam Cyclic nucleotide-binding domain 533 617 IPR000595 -
Prci2g2075 938 PANTHER POTASSIUM CHANNEL AKT1 163 935 IPR045319 GO:0005249|GO:0006813
Prci2g2075 938 SMART cnmp_10 513 631 IPR000595 -
Prci2g2075 938 SUPERFAMILY Voltage-gated potassium channels 187 438 - -
Prci2g2075 938 Gene3D Helix hairpin bin 440 496 - -
Prci2g2075 938 SUPERFAMILY cAMP-binding domain-like 441 630 IPR018490 -
Prci2g2075 938 CDD CAP_ED 513 627 IPR000595 -
Prci2g2075 938 ProSiteProfiles Ankyrin repeat profile. 689 721 IPR002110 GO:0005515
Prci2g2075 938 ProSiteProfiles KHA domain profile. 865 938 IPR021789 -
Prci2g2075 938 PRINTS EAG/ELK/ERG potassium channel family signature 337 347 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g2075 938 PRINTS EAG/ELK/ERG potassium channel family signature 385 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g2075 938 PRINTS EAG/ELK/ERG potassium channel family signature 429 438 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g2075 938 PRINTS EAG/ELK/ERG potassium channel family signature 228 238 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g2075 938 Gene3D - 194 439 - -
Prci2g2075 938 ProSiteProfiles cAMP/cGMP binding motif profile. 513 633 IPR000595 -
Prci2g2075 938 SUPERFAMILY Ankyrin repeat 661 841 IPR036770 -
Prci2g2075 938 ProSiteProfiles Ankyrin repeat profile. 786 818 IPR002110 GO:0005515
Prci2g2075 938 FunFam Potassium channel SKOR 193 438 - -
Prci2g2075 938 Pfam Ankyrin repeats (3 copies) 762 839 IPR002110 GO:0005515
Prci2g2075 938 Pfam Ankyrin repeats (3 copies) 664 751 IPR002110 GO:0005515
Prci2g2075 938 Gene3D - 754 849 IPR036770 -
Prci2g2075 938 PRINTS Ankyrin repeat signature 769 783 IPR002110 GO:0005515
Prci2g2075 938 PRINTS Ankyrin repeat signature 690 705 IPR002110 GO:0005515
Prci2g2075 938 SMART ANK_2a 786 815 IPR002110 GO:0005515
Prci2g2075 938 SMART ANK_2a 819 848 IPR002110 GO:0005515
Prci2g2075 938 SMART ANK_2a 689 718 IPR002110 GO:0005515
Prci2g2075 938 SMART ANK_2a 722 751 IPR002110 GO:0005515
Prci2g2075 938 SMART ANK_2a 753 782 IPR002110 GO:0005515
Prci2g2075 938 ProSiteProfiles Ankyrin repeat region circular profile. 786 818 - -
Prci2g2075 938 ProSiteProfiles Ankyrin repeat region circular profile. 689 721 - -
Prci2g2075 938 ProSiteProfiles Ankyrin repeat region circular profile. 722 753 - -
Prci2g2075 938 Gene3D - 646 753 IPR036770 -
Prci2g2075 938 Pfam Ion transport protein 193 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2075 Prci-Chr2 15855172 15871046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2075 764 839 Ion Channels AT5G37500 32.653 6.76e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2075 K21867 - gmx:100814385 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2075 2 15855172 15871046 Prci2g2075 2 15855172 15871046 ECH