Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2073 ATGAATTATCCAGTTCTTCCTTTCGTTTCTCAGCTTTCCTGGTTAAAGAAAATGGATGCTCAAGCCCAAAAAAAGGCATTATTTCGTGCTAAATTGAATGCTCAGAAGAAGGAAAAGCGCATAGATTCCCCTCTTGTGAGGTATAATGAATTTGATCAGCCGGTCTGCCGGGTTTGTGATGTTGTTCTGAAGCATGAATCTAACTGGGATGCACACCAAATTTCTCGTAAGCATCGTGAGGCAATAAATAATCTTAAAGCTAATGCTGCTGGATTAGCCCAGCAAAGTCATGCAAAGCCTGTTGCAGATACCAAGTTGCCTAAGCCTAAACCTGAGAATGCTTCAGAATCACAATCTAAAATGCTCAATCATTCGCAAGAATCACCAAAACCTCCACCATCATCTGTGCTTCCACCAGATTTTTTTGATGACAACAGTGCTCGAAAGCCAAGATCAGAAAAGGACTCTGTCCAGTCGGTGGACCCTGATTCAGATAAAAGAATGGGGATTTCTGCTCAGAGCCAAGTGTTAAACGCAGAGAAGTTGAAAGGTGGTTTACATAGCAATAATGCAGCACAGCCAAAGGGAAGTCAGGCTGCAATGGAGGCTAGTCAGACATCAGGCATGCCTGCTGATACAGAAGCCAAACAAGTAAAAGGGGTTCTTCCTGAAGGGTTTTTTGATAACAAGGATGCTGATTTGCGTGCTCGTGGCATAAAACCTGTTAAACCTGATGTCAAGGACGAGTACAAGGAATTTGAAAAGTTGATTCAAGACGACTTGCAGGAGGTGGATGACCGGTTTGAGGAAGAGGAGATTGATGCTGCTGAAATGATTGAAGAAGCTGAATCCGTAGAGCAGAAGAACAACAGAGAGAGAGTGGAGAAGTTGAGGAAGAGGAGATTGGAGTTGAAGGCTGCTAAAGATGCAAAGCGTAGTAAAACTTCTGAGGTGGTAATGGAGTCTAAACGTGACGAGCCATCAAGCGATGATGACAGTGAAGATGATTTTGCAGTGGACTGGAGAGCACAACACCTGTGA 1041 0.4361 MNYPVLPFVSQLSWLKKMDAQAQKKALFRAKLNAQKKEKRIDSPLVRYNEFDQPVCRVCDVVLKHESNWDAHQISRKHREAINNLKANAAGLAQQSHAKPVADTKLPKPKPENASESQSKMLNHSQESPKPPPSSVLPPDFFDDNSARKPRSEKDSVQSVDPDSDKRMGISAQSQVLNAEKLKGGLHSNNAAQPKGSQAAMEASQTSGMPADTEAKQVKGVLPEGFFDNKDADLRARGIKPVKPDVKDEYKEFEKLIQDDLQEVDDRFEEEEIDAAEMIEEAESVEQKNNRERVEKLRKRRLELKAAKDAKRSKTSEVVMESKRDEPSSDDDSEDDFAVDWRAQHL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2073 346 Coils Coil 75 95 - -
Prci2g2073 346 MobiDBLite consensus disorder prediction 305 346 - -
Prci2g2073 346 MobiDBLite consensus disorder prediction 91 218 - -
Prci2g2073 346 PANTHER UNCHARACTERIZED 18 346 IPR040050 GO:0003676|GO:0005681|GO:0008270
Prci2g2073 346 MobiDBLite consensus disorder prediction 111 130 - -
Prci2g2073 346 Pfam Zinc-finger of C2H2 type 56 78 - -
Prci2g2073 346 MobiDBLite consensus disorder prediction 305 327 - -
Prci2g2073 346 MobiDBLite consensus disorder prediction 190 212 - -
Prci2g2073 346 SUPERFAMILY beta-beta-alpha zinc fingers 48 88 IPR036236 -
Prci2g2073 346 Coils Coil 261 314 - -
Prci2g2073 346 Gene3D Classic Zinc Finger 49 87 - -
Prci2g2073 346 MobiDBLite consensus disorder prediction 144 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2073 Prci-Chr2 15843595 15848248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2073 18 346 C2H2 Transcription Factor Family AT3G02860 50.888 5.37e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2073 K13104 - gmx:100802710 394.045