Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2072 ATGTTCTTGCGATTGGAGGAGGAGGAGGAAGAAGAAGAAGAAAGAAGAACGAACCCTTCGAGCCTCGACCTTGTACCTGGAGACAATACTAGCATTTCTGAAGCGAGGTATAATGAATTTGATCAGCCGGTCTGCCGGGTTTGTGATGTTGTTCTGAAGCATGAATCTAACTGGGATGCACACCAAATTTCTCGTAAGCATCGTGAGGCAATAAATAATCTTAAAGCTAATGCTGCTGGATTAGCCCAGCAAAGTCATGCAAAGCCTGTTGCAGATACCAAGTTGCCTAAGCCTAAACCTGAGAATGCTTCAGAATCACAATCTAAAATGCTCAATCATTCGCAAGAATCACCAAAACCTCCACCATCATCTGTGCTTCCACCAGATTTTTTTGATGACAACAGTGCTCGAAAGCCAAGATCAGAAAAGGACTCTGTCCAGTCGGTGGACCCTGATTCAGATAAAAGAATGGGGATTTCTGCTCAGAGCCAAGTGTTAAACGCAGAGAAGTTGAAAGGTGGTTTACATAGCAATAATGCAGCACAGCCAAAGGGAAGTCAGGCTGCAATGGAGGCTAGTCAGACATCAGGCATGCCTGCTGATACAGAAGCCAAACAAGTAAAAGGGGTTCTTCCTGAAGGGTTTTTTGATAACAAGGATGCTGATTTGCGTGCTCGTGGCATAAAACCTGTTAAACCTGATGTCAAGGACGAGTACAAGGAATTTGAAAAGTTGATTCAAGACGACTTGCAGGAGGTGGATGACCGGTTTGAGGAAGAGGAGATTGATGCTGCTGAAATGATTGAAGAAGCTGAATCCGTAGAGCAGAAGAACAACAGAGAGAGAGTGGAGAAGTTGAGGAAGAGGAGATTGGAGTTGAAGGCTGCTAAAGATGCAAAGCGTAGTAAAACTTCTGAGGTGGTAATGGAGTCTAAACGTGACGAGCCATCAAGCGATGATGACAGTGAAGATGATTTTGCAGTGGACTGGAGAGCACAACACCTGTGA 1008 0.4464 MFLRLEEEEEEEEERRTNPSSLDLVPGDNTSISEARYNEFDQPVCRVCDVVLKHESNWDAHQISRKHREAINNLKANAAGLAQQSHAKPVADTKLPKPKPENASESQSKMLNHSQESPKPPPSSVLPPDFFDDNSARKPRSEKDSVQSVDPDSDKRMGISAQSQVLNAEKLKGGLHSNNAAQPKGSQAAMEASQTSGMPADTEAKQVKGVLPEGFFDNKDADLRARGIKPVKPDVKDEYKEFEKLIQDDLQEVDDRFEEEEIDAAEMIEEAESVEQKNNRERVEKLRKRRLELKAAKDAKRSKTSEVVMESKRDEPSSDDDSEDDFAVDWRAQHL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2072 335 MobiDBLite consensus disorder prediction 179 201 - -
Prci2g2072 335 MobiDBLite consensus disorder prediction 133 151 - -
Prci2g2072 335 MobiDBLite consensus disorder prediction 294 335 - -
Prci2g2072 335 Pfam Zinc-finger of C2H2 type 45 67 - -
Prci2g2072 335 MobiDBLite consensus disorder prediction 294 316 - -
Prci2g2072 335 Coils Coil 64 84 - -
Prci2g2072 335 Coils Coil 250 303 - -
Prci2g2072 335 SUPERFAMILY beta-beta-alpha zinc fingers 25 75 IPR036236 -
Prci2g2072 335 PANTHER UNCHARACTERIZED 34 335 IPR040050 GO:0003676|GO:0005681|GO:0008270
Prci2g2072 335 MobiDBLite consensus disorder prediction 80 207 - -
Prci2g2072 335 Gene3D Classic Zinc Finger 33 76 - -
Prci2g2072 335 MobiDBLite consensus disorder prediction 1 35 - -
Prci2g2072 335 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2072 Prci-Chr2 15843595 15848276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2072 35 335 C2H2 Transcription Factor Family AT3G02860 48.065 5.06e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2072 K13104 - gmx:100802710 344.739