Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2068 ATGAAAAGGGCTGATTCAGGTCCAAATCACTCGAGCCAGCTGACGACGTCACTATTCAACGAAACCGGGAAACCGCCAAGGGACGTCGGCGTGCAGCGTAATTCCCAGGATTCGGAAGACCTCGAACACGGTGTTTTGGCAAGAGCTTATTCTTCGACCAAAGATAAAAAGATACATAAGCGGATGGACAGAGCCAAGTATGTGGCATTGGTGGGAGCTGGAGCTCTCTTGGGCTCTGTGTCTACCGTCTTCGTTCTAAAGCTTCTACAAAATGTACAGCAATGCCGAAAGAATACTACTGAATTAAACGGTATGGAGAGATGTACTGCCACTCATAAAAAGAATGATAAGGTGGCTAATGAAGATCTTCTAAATGATGAGATTGTTTCTGAACACCTGACTAGGAACATTCAGTTCTTTGGTTTTGAATCTCAAAGGAAAGTGACTGCATCATATGTTGTGGTCATTGGCCTTGGAGGGGTTGGTAGTCATGCTGCATCTATGCTTTTGAGGTCAGGGGTTGGCAAGCTACTTCTAGTGGACTTTGACCAGGTTTCTCTTTCTTCACTAAATCGACACGCTGTTGCAACAAGAGCAGATGTTGGCATCCCAAAAGCTCAGTGCCTCAAGGAGCATTTCTTATCTATTTTCCCGGAGTGCCAAATAGATGCAAAAGTTCTGTTATATGATACATCTACTGAAGAAGAAATTCTCTCAGGCCACCCTGATTTTGTTCTGGACTGCATTGACAACATTGATACAAAGGTGGCCCTTCTTGCTGCATGTGTACGTAGGGGATTGAAGGTTCTATCTGCTATGGGAGCTGGTGCTCGGGCCGATCCAACAAGAATACGCATTGCTGATCTAAGAGAATCCACTAATGATCCATTATCTCGAGCTGTAAGACACCGCTTGAGGAAAGATCATGGCATTGAAGGTGGTATTCCTGTTGCCTTTTCTTTAGAGAAACCCAAAGTAAAGTTGCTTCCATTCAAAGGACCAAGTGGAGAAGGGGAAAACCCTTCAGACTATCAGATTGTACCAGGCTTTAGGGTCCGTATCATACCTGTGCTGGGCTCCATCCCGGCAATATTTGGACAAGTCATGGCCTCCTATGTTGTGACATGTCTAGCAGGGTTGCAAGTTCAAACAGAACCTGTAGTCAATTTTGACACGGATCATTACCATACTCTTCATCAGCGCCTAATTGAGCATGAGGAGTCATTGTATGGCTCAGCTGTGCATGTGCAGGTTGATGTGGAAGAAGTGATGTATATTGCCAAAGAATTGTGGCACGGCAGAAGTGCTAGAGAGCAGTTTGCTAAAGATGTTGGACGAGGGATGTGGCGATCAGTTAATGAATTGATGCTTGTAAGGTGGGATCGCACTAAACCGGCCAATGTTTCAAATCTAATTCTTTTAAAATTCAAAGAGGCGGATGAGCATGAGTCACGGACAATAGATGATATAAAGAAGGAAGAACCAGAATTCTACAAGAGAGTAACTGGCGTTCTAAGACGAGCTGAACTTGACTTTGGGTTGTGA 1545 0.4453 MKRADSGPNHSSQLTTSLFNETGKPPRDVGVQRNSQDSEDLEHGVLARAYSSTKDKKIHKRMDRAKYVALVGAGALLGSVSTVFVLKLLQNVQQCRKNTTELNGMERCTATHKKNDKVANEDLLNDEIVSEHLTRNIQFFGFESQRKVTASYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECQIDAKVLLYDTSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSAMGAGARADPTRIRIADLRESTNDPLSRAVRHRLRKDHGIEGGIPVAFSLEKPKVKLLPFKGPSGEGENPSDYQIVPGFRVRIIPVLGSIPAIFGQVMASYVVTCLAGLQVQTEPVVNFDTDHYHTLHQRLIEHEESLYGSAVHVQVDVEEVMYIAKELWHGRSAREQFAKDVGRGMWRSVNELMLVRWDRTKPANVSNLILLKFKEADEHESRTIDDIKKEEPEFYKRVTGVLRRAELDFGL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2068 514 MobiDBLite consensus disorder prediction 1 42 - -
Prci2g2068 514 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 131 416 IPR035985 GO:0008641
Prci2g2068 514 CDD YgdL_like 140 374 - -
Prci2g2068 514 Pfam ThiF family 134 396 IPR000594 -
Prci2g2068 514 MobiDBLite consensus disorder prediction 7 22 - -
Prci2g2068 514 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 72 512 IPR045886 -
Prci2g2068 514 Gene3D - 124 390 - -
Prci2g2068 514 FunFam tRNA threonylcarbamoyladenosine dehydratase 2-like 125 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2068 Prci-Chr2 15828036 15839794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2068 174 276 Sulfurtransferasese or Rhodanese AT5G55130 30.097 8.60e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2068 K22132 - gmx:100815445 780.4