Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2065 ATGCTGAAGCAACATGCTGAAGCAAATGGACCAAAAGATCCATTTCGGATTGAGATGGCTGATAAGCTCTTAGAAAAGCTGTACAATATTGGCGTGATTCCAACCAGGCAAAGCATTACACTTTGTGATCGTCTAACAGTGTCATCCTTTTGTAGGCGTAGGCTTGCAACTGTTTTGGTGCGATTAAAATTTGCCGAGTACTTGAAAGAAGCTGTCACATACATTGAACAGGGGCATATAAGAGTTGGTCCAGAGACAGTCACTGATCCTGCATTCCTTGTAACCAGAAATATGGAAGACTTTATCACATGGGTGGATTCATCGAAGATAAAGAGAAAGGTTCTACAGTACAATGACAAATTGGATGACTATGATCTAATGAACTGA 387 0.4057 MLKQHAEANGPKDPFRIEMADKLLEKLYNIGVIPTRQSITLCDRLTVSSFCRRRLATVLVRLKFAEYLKEAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2065 128 ProSiteProfiles S4 RNA-binding domain profile. 53 119 - -
Prci2g2065 128 SMART s4_6 53 116 IPR002942 GO:0003723
Prci2g2065 128 FunFam U3 small nucleolar ribonucleoprotein IMP3 53 125 - -
Prci2g2065 128 Pfam S4 domain 53 99 IPR002942 GO:0003723
Prci2g2065 128 SUPERFAMILY Alpha-L RNA-binding motif 14 121 - -
Prci2g2065 128 PANTHER 30S 40S RIBOSOMAL PROTEIN 9 124 IPR022801 GO:0003735|GO:0015935|GO:0019843
Prci2g2065 128 Gene3D - 53 128 IPR036986 GO:0003723
Prci2g2065 128 CDD S4 53 121 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2065 12 94 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 34.524 6.29e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2065 K14560 - gmx:100798516 229.565