Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2053 ATGAAGTCTCTGCTGCCGCTTAACTTCTTGGTTCCTGCTTTGTCGCTGTGCCTGCTCGCCGTCGTAGGCGCAGATCTAGCTTCTGATAGAGCTGCTTTGGTGGCTCTTCGTGGTGCCGTTGGTGGCCGTTCCCTTCTCTGGAACCTCTCTCAGACGAGTCCTTGCTCATGGACGGGTGTGTTCTGTGAAAATTCTGCAAGGAACAGGATCACTACGTTGCGGCTTCCTGGTATGGGTCTTTCTGGGAGACTTCCACTGGGAATTGGGAACCTCACTGAGCTCCAGACTCTGTCTCTTCGCTACAACGCGCTCTCTGGGCCGATTCCGAGCGACTTTGCTAATCTTGTTAACCTTCGAAACCTTTATTTGCAGGGGAATTTCTTCTCTGGAGAAATCCCTGATTTCCTTTATGGTATGCAGAACTTGGTTCGTTTGAATTTAGCTAAAAACAATTTCAGTGGAGGGATCTCGCCGAAATTTAATAACCTCACAAGGTTGGATACCCTCCTTTTGGACAACAACCAGCTCACTGGGTCCATTCCTGACTTGACTGCTCCTCTTGATCAGTTTAATGTTTCGTCGAATCGGCTCAACGGCTCCATTCCCACAAAGTTTTCTGATCGAGACGCGAGTGCATTTTCGGGGAATTTGTTTCTTTGCGGGAAACCCTTACAAGAATGCGCTGGAACGGAGGGTGGGACGACGAAGAAGAAGAAGAAGTTATCAGGTGGAGCAATTGCAGGAATTGTAATTGGTTCAGTGGTCGGACTTCTGTTGATTTTACTTCTTCTGTTCTTCTTGTGCGGAAAAAGGAAAAGTAAAGACAAGGATTCGAGGGATATAACACCGGGTAAGAACGTCGAGGTTGAAATTCCTCAAGAAAAGACAACTAGAGATATTGAGAATTCTGGAGCAAGTTTTTCAGCAACAGCCAGAGGTGGTGATGCTAAGACCGGTAGGAGTAAGAGATTGGTCTTTTTTGGTAATGTCAGCAGAGTGTTTGATCTTGAGGATTTGTTAAGGGCATCAGCTGAAGTACTGGGGAAAGGCACCTTTGGAACCACATATAAGGCTACTTTGGAAATGGGGGTGGTGGTGGCAGTGAAGAGGTTGAAGGATGTAACTGCAGCCGAAAACGAATTCAGAGAGAAAATTGAGCAAGTAGGAAAGATGGTTCATGATAACTTAGTCCCGCTCAGAGCTTACTATTATAGCAACGAAGAAAAGCTTCTTGCCTATGATTACATGCCCATGGGAAGCCTATCTGCTCTTTTGCACGCAAATAACGGAGCTGGCAGAACTCCACTAAACTGGGAAACAAGGTCTCGCATTGCCCTTGGTGCTGCCCGTGGAATTGCTTACCTCCACTCACATGGCCCATCTGTCCATGGAAATATCAAGTCATCAAATATCCTTCTCACCAAATCTTTTGAAGCTCGTGTTTCTGACTTTGGCCTTGCTCATCTCGCACTCCCAACTTCAACCCCGAACCGAGTTTCTGGTTACCGAGCCCCGGAGGTAACAGATGCTCGCAAAGTATCCCAAAAGGCCGATGTCTACAGCTTTGGCATAATGCTCTTGGAACTGCTTACTGGGAAAGCTCCAACACATTCCTCGTTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTTCAATCTATTGTTCAAGAGGAGTGGAACACTGAGGTATTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTTTTGCAGCTTGCACTCGAATGTACTGAACAGTATCCTGACAATCGACCCTCAATGGATGTGGTGGCGAGCAGAATTGAGGAGATTTGTCGTGCTAGTTTAGAGAAAGAGGAAGAGAAGATTCAATCAATAACAGACCCCGATTGTGGATATTCCCCACCGTGA 1905 0.4688 MKSLLPLNFLVPALSLCLLAVVGADLASDRAALVALRGAVGGRSLLWNLSQTSPCSWTGVFCENSARNRITTLRLPGMGLSGRLPLGIGNLTELQTLSLRYNALSGPIPSDFANLVNLRNLYLQGNFFSGEIPDFLYGMQNLVRLNLAKNNFSGGISPKFNNLTRLDTLLLDNNQLTGSIPDLTAPLDQFNVSSNRLNGSIPTKFSDRDASAFSGNLFLCGKPLQECAGTEGGTTKKKKKLSGGAIAGIVIGSVVGLLLILLLLFFLCGKRKSKDKDSRDITPGKNVEVEIPQEKTTRDIENSGASFSATARGGDAKTGRSKRLVFFGNVSRVFDLEDLLRASAEVLGKGTFGTTYKATLEMGVVVAVKRLKDVTAAENEFREKIEQVGKMVHDNLVPLRAYYYSNEEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRSRIALGAARGIAYLHSHGPSAXHGNIKSSNILLTKSFEARVSDFGLAHLALPTSTPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDMELLRYQNVEEEMVKLLQLALECTEQYPDNRPSMDVVASRIEEICRASLEKEEEKIQSITDPDCGYSPP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2053 635 SUPERFAMILY Protein kinase-like (PK-like) 345 606 IPR011009 -
Prci2g2053 635 SUPERFAMILY L domain-like 47 207 - -
Prci2g2053 635 Coils Coil 572 592 - -
Prci2g2053 635 Gene3D Phosphorylase Kinase; domain 1 309 415 - -
Prci2g2053 635 FunFam pollen receptor-like kinase 1 310 415 - -
Prci2g2053 635 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Prci2g2053 635 CDD STKc_IRAK 347 610 - -
Prci2g2053 635 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Prci2g2053 635 PANTHER OS05G0588300 PROTEIN 11 614 - -
Prci2g2053 635 FunFam Probable inactive receptor kinase At1g48480 416 618 - -
Prci2g2053 635 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Prci2g2053 635 Gene3D Transferase(Phosphotransferase) domain 1 416 630 - -
Prci2g2053 635 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Prci2g2053 635 ProSiteProfiles Protein kinase domain profile. 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2053 635 Pfam Protein kinase domain 344 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2053 635 Gene3D Ribonuclease Inhibitor 185 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2053 Prci-Chr2 15628269 15631430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2053 9 610 Receptor kinase-like Gene Family AT1G48480 58.476 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g2053 Pkinase 5.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2053 - - qsa:O6P43_020574 826.239