Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2044 ATGGGAAGGCAGCCCTGCTGTGACAAGGTTGGACTGAAGAAAGGCCCTTGGACTGCTGATGAAGACAAGAAGCTGATCAATTTCCTCCTCAACAATGGCCAATGTTGCTGGAGGACTGTCCCTAAGCTCGCAGGGCTTTTGAGGTGTGGCAAAAGTTGCAGGCTGAGATGGACTAACTATCTCAGACCAGACCTGAAGAGAGGTCTTCTTTCTGATTATGAAGAAAAAATGGTGATTGATCTCCACGCCCAACTTGGCAACAGATGGTCTAAGATTGCGTCTCATCTTCCTGGAAGAACTGATAATGAGATCAAGAACCATTGGAACACGCACATCAAGAAGAAGCTCAAGAAAATGGGGATTGATCCTGTCACTCACAAGCCTCTCGTCTCTGACCAAGTCCAGAATCCGCCATCGCAGATTAATCAAATACAGATACAGCAGCAACGGCCTCTGGCAGCTAGCCTCAAGATTGATCGGAATCGAGAGCTAAAGAAGGCAGACACATCGTATGAGTCATCGTCGACCTTGACTGAATCGAAAGAGGAGGACAAGATTGAAACTCCACCATGTGACGACATCATGATGAACAGTTTCTGTACTGATGAGGTTCCATTAATCGAACCTGATGAGATTCTCATGCTCTCTGATCCCACCCCTTCATCTTCATCTTCTTCTTCTTCTTCCAATTCTTCTAACTTCCTCGGAAACCTGGACCTCTCAGAATTCGAGTGGGCTTGTAATTACATTGACTACAACAACAACATTGACATGAAAAGCAACGATAGTAGCAACAGTATGGAATTGTGGGATGATGATTTTATGAGCAGTTTGGATTTTCTTCTGAACGATAACGAGGATGTTGACAGAAAGATCACAGATTTTGATTCTGCTCTCAAACAATGTCCGAGCAGGGCCACGGATCAAGAATCTTGGGCATATGGGTTGTTTTGA 954 0.4486 MGRQPCCDKVGLKKGPWTADEDKKLINFLLNNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSDYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLVSDQVQNPPSQINQIQIQQQRPLAASLKIDRNRELKKADTSYESSSTLTESKEEDKIETPPCDDIMMNSFCTDEVPLIEPDEILMLSDPTPSSSSSSSSSNSSNFLGNLDLSEFEWACNYIDYNNNIDMKSNDSSNSMELWDDDFMSSLDFLLNDNEDVDRKITDFDSALKQCPSRATDQESWAYGLF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2044 317 Gene3D - 70 136 - -
Prci2g2044 317 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci2g2044 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci2g2044 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 235 - -
Prci2g2044 317 FunFam Myb transcription factor 71 133 - -
Prci2g2044 317 CDD SANT 16 61 IPR001005 -
Prci2g2044 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci2g2044 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci2g2044 317 Gene3D - 11 67 - -
Prci2g2044 317 SMART sant 66 114 IPR001005 -
Prci2g2044 317 SMART sant 13 63 IPR001005 -
Prci2g2044 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci2g2044 317 MobiDBLite consensus disorder prediction 165 194 - -
Prci2g2044 317 FunFam MYB transcription factor 11 67 - -
Prci2g2044 317 Pfam Myb-like DNA-binding domain 74 111 IPR001005 -
Prci2g2044 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci2g2044 317 CDD SANT 74 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2044 Prci-Chr2 15570636 15572144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2044 1 284 MYB Transcription Factor Family AT1G66230 57.718 3.33e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g2044 Myb_DNA-binding 7.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2044 K09422 - gmx:100800494 387.882