Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2006 ATGAGATGGTTGAATTATCTGAAACCCAACATCAACCGAGGAAGCTTCACCGACGACGAGGTTGACATGATTCAAAGGTTCCATAAACTTCTGGGCAACAGATGGTCGTTGATAGCTGGAAGGCTGCCAGGAAGAACAGCGAATGACGTGAAGAATTTCTGGCACACCAACATGCGGAAGAGGAAGAATAAAGAAGAAAGCCATGGGACGAAAGCAAAAGAGGATCAGACAGAAGAAGTAAAACAGCACGTAGTGATAAAACCTCAGCCTCACACTTTCTCTAAGAATTCGCCATGGCTGAGGAGGAATAATAATAATATTAAGATTGTTTCCGCAAGTGAAGGTGGTGACACTGATATTATTAATGCTGAAACTGGAACTAGTTCTAGTGGTGATATGAAAGAGAGTGTTGCAGAGCCATGTGCTGTTCATTTTACTCAGAGAGATAAATTAGAAGCGTGGTGGGCGAGTTTGCTGAATGATGAAGGAGATGATGAAGGGCAAGCTGGGAATTTCACTATGGAGTTTTGGGACCAAGAAGATTTTCTGAAAATTGAAGGTCCATTCGGGGAAGGCCTGGGTAGTTGTTGGAGTCAGTCATTGCTCATATAA 612 0.4297 MRWLNYLKPNINRGSFTDDEVDMIQRFHKLLGNRWSLIAGRLPGRTANDVKNFWHTNMRKRKNKEESHGTKAKEDQTEEVKQHVVIKPQPHTFSKNSPWLRRNNNNIKIVSASEGGDTDIINAETGTSSSGDMKESVAEPCAVHFTQRDKLEAWWASLLNDEGDDEGQAGNFTMEFWDQEDFLKIEGPFGEGLGSCWSQSLLI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2006 203 CDD SANT 15 58 IPR001005 -
Prci2g2006 203 SMART sant 12 60 IPR001005 -
Prci2g2006 203 Pfam Myb-like DNA-binding domain 13 56 IPR001005 -
Prci2g2006 203 SUPERFAMILY Homeodomain-like 2 65 IPR009057 -
Prci2g2006 203 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 131 - -
Prci2g2006 203 ProSiteProfiles Myb-like domain profile. 8 58 IPR001005 -
Prci2g2006 203 MobiDBLite consensus disorder prediction 59 81 - -
Prci2g2006 203 Gene3D - 14 87 - -
Prci2g2006 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2006 Prci-Chr2 15212751 15214878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2006 1 159 MYB Transcription Factor Family AT1G66370 42.012 2.16e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g2006 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2006 - K16166 pcin:129304058 429.483